Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45735 Brassica carinata HOM05D000209 ORTHO05D000129 6.2e-51 203.8 98 100.0
BcaB02g10890 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-25 119.0 101 60.4
A05p18310 Brassica napus HOM05D000209 ORTHO05D000129 7.7e-25 117.1 100 63.0
BraA05t20724Z Brassica rapa HOM05D000209 ORTHO05D000129 7.7e-25 117.1 100 63.0
BcaC08g44081 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-23 110.9 100 60.0
C06p14860 Brassica napus HOM05D000209 ORTHO05D000129 8.0e-22 107.1 96 61.5
BolC6t36664H Brassica oleracea HOM05D000209 ORTHO05D000129 8.0e-22 107.1 96 61.5
BcaC08g44085 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-21 105.5 100 57.0
C06p14880 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-21 105.1 101 55.4
AL4G15010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.0e-21 104.8 102 55.9
C06p14840 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-21 104.8 107 52.3
BolC6t36662H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-21 104.8 107 52.3
AL3G30600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-20 102.8 103 54.4
BraA05t20726Z Brassica rapa HOM05D000209 ORTHO05D000129 2.6e-20 102.1 103 53.4
A05p18360 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-20 101.3 102 52.9
BraA08t32214Z Brassica rapa HOM05D000209 ORTHO05D000129 4.4e-20 101.3 108 56.5
A08p01610 Brassica napus HOM05D000209 ORTHO05D000129 9.7e-20 100.1 108 55.6
BcaC01g01386 Brassica carinata HOM05D000209 ORTHO05D000129 4.8e-19 97.8 108 55.6
C03p91460 Brassica napus HOM05D000209 ORTHO05D000129 4.8e-19 97.8 108 55.6
BolC3t21464H Brassica oleracea HOM05D000209 ORTHO05D000129 4.8e-19 97.8 108 55.6
BcaB02g10954 Brassica carinata HOM05D000209 ORTHO05D000129 8.2e-19 97.1 109 52.3
CARHR092860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.1e-18 94.7 99 54.5
BcaB04g17085 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-17 92.8 110 50.9
AT3G17540 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.5e-17 91.7 102 52.9
A08p01590 Brassica napus HOM05D000209 ORTHO05D000129 4.5e-17 91.3 106 51.9
BcaNung01175 Brassica carinata HOM05D000209 ORTHO05D000129 3.8e-16 88.2 83 56.6
BcaC02g12696 Brassica carinata HOM05D000209 ORTHO05D000129 6.5e-16 87.4 100 52.0
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.5e-15 85.5 102 52.0
BcaB02g10950 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-15 85.5 101 47.5
C06p14180 Brassica napus HOM05D000209 ORTHO05D000129 4.2e-15 84.7 103 46.6
BolC6t36595H Brassica oleracea HOM05D001962 ORTHO05D002236 4.2e-15 84.7 103 46.6
Carub.0004s0385 Capsella rubella HOM05D000209 ORTHO05D000129 9.4e-15 83.6 104 47.1
Carub.0004s0386 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-13 79.3 103 47.6
BolC6t35985H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-13 78.2 84 52.4
C06p09120 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-12 75.5 74 55.4
BcaC08g43521 Brassica carinata HOM05D000209 ORTHO05D000129 4.4e-12 74.7 74 55.4
Thhalv10020988m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.4e-12 74.7 103 42.7
Carub.0003s1724 Capsella rubella HOM05D000209 ORTHO05D000129 1.7e-11 72.8 102 45.1
AL3G30330 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-11 71.6 103 40.8
BolC4t21842H Brassica oleracea HOM05D000209 ORTHO05D000129 4.8e-11 71.2 102 45.1
BcaB04g20837 Brassica carinata HOM05D000209 ORTHO05D000129 6.3e-11 70.9 114 39.5
BcaC02g12812 Brassica carinata HOM05D000209 ORTHO05D000129 6.3e-11 70.9 102 44.1
BolC4t21813H Brassica oleracea HOM05D000209 ORTHO05D000129 6.3e-11 70.9 102 44.1
BcaC02g12514 Brassica carinata HOM05D000209 ORTHO05D039965 8.3e-11 70.5 102 45.1
BcaB02g10978 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-10 70.1 111 40.5
C03p91480 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-10 69.7 77 48.1
BolC3t21466H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-10 69.7 77 48.1
A05p18300 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-10 68.9 64 57.8
A05p32320 Brassica napus HOM05D000209 ORTHO05D000129 7.0e-10 67.4 100 37.0
Sp3g15690 Schrenkiella parvula HOM05D000209 ORTHO05D000129 7.0e-10 67.4 95 42.1
Carub.0003s1727 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-09 66.6 104 43.3
Thhalv10002957m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.2e-09 66.6 106 41.5
BcaC09g48713 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-09 66.2 100 46.0
A01p36780 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-09 66.2 100 46.0
BraA01t03739Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-09 66.2 100 46.0
Thhalv10026986m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.0e-09 65.9 104 35.6
CARHR099980 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-09 65.5 98 38.8
AT3G17280 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.5e-09 65.1 103 39.8
AT2G24510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.5e-09 64.7 67 53.7
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.9e-09 64.3 84 47.6
AT3G17570 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-08 62.8 103 40.8
Carub.0003s2653 Capsella rubella HOM05D000209 ORTHO05D000129 3.8e-08 61.6 97 33.0
BcaB02g10951 Brassica carinata HOM05D000209 ORTHO05D000129 8.5e-08 60.5 76 47.4
BcaB04g20836 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-07 60.1 100 43.0
AL3G30630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-07 59.3 103 41.7
A03p40230 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-07 58.9 106 39.6
CARHR093690 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.2e-07 58.5 101 36.6
BraA01t03390Z Brassica rapa HOM05D000209 ORTHO05D000129 4.2e-07 58.2 98 38.8
BcaC09g49177 Brassica carinata HOM05D000209 ORTHO05D000129 5.5e-07 57.8 97 36.1
C01p41770 Brassica napus HOM05D000209 ORTHO05D000129 5.5e-07 57.8 97 36.1
A01p32620 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 98 36.7
C01p46920 Brassica napus HOM05D000209 ORTHO05D000129 7.2e-07 57.4 102 37.3
BolC1t04663H Brassica oleracea HOM05D000209 ORTHO05D000129 7.2e-07 57.4 102 37.3
Thhalv10022250m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.2e-07 57.4 112 35.7
BcaC09g48686 Brassica carinata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 102 37.3
BcaC09g48899 Brassica carinata HOM05D000209 ORTHO05D000129 9.4e-07 57.0 99 37.4
C01p44650 Brassica napus HOM05D000209 ORTHO05D000129 9.4e-07 57.0 99 37.4
BolC1t04433H Brassica oleracea HOM05D000209 ORTHO05D000129 9.4e-07 57.0 99 37.4
AT3G22730 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-06 56.6 100 30.0
BcaC01g05687 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 56.6 106 34.9
C03p23190 Brassica napus HOM05D000209 ORTHO05D018688 1.2e-06 56.6 106 34.9
BolC3t14720H Brassica oleracea HOM05D000209 ORTHO05D018688 1.2e-06 56.6 106 34.9
Aa31LG3G7390 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.6e-06 56.2 98 34.7
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.1e-06 55.8 105 36.2
BcaC06g35672 Brassica carinata HOM05D000209 ORTHO05D000129 2.7e-06 55.5 108 38.0
A07p08080 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-06 55.5 108 38.0
C07p12230 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-06 55.5 108 38.0
BraA07t28593Z Brassica rapa HOM05D000209 ORTHO05D000129 2.7e-06 55.5 108 38.0
CARHR092810 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.7e-06 55.5 97 39.2
Thhalv10027561m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.7e-06 55.5 104 32.7
AL3G32310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-06 55.1 97 34.0
Carub.0003s1975 Capsella rubella HOM05D000209 ORTHO05D000129 3.6e-06 55.1 108 37.0
AT3G19470 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.7e-06 54.7 104 37.5
C05p48910 Brassica napus HOM05D000209 ORTHO05D000129 4.7e-06 54.7 105 34.3
BolC5t33632H Brassica oleracea HOM05D000209 ORTHO05D000129 4.7e-06 54.7 105 34.3
Sp3g21250 Schrenkiella parvula HOM05D000209 ORTHO05D000129 4.7e-06 54.7 102 33.3
Sp7g11920 Schrenkiella parvula HOM05D000209 ORTHO05D000129 4.7e-06 54.7 97 39.2
Thhalv10021918m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.1e-06 54.3 100 37.0
Sp3g17310 Schrenkiella parvula HOM05D000209 ORTHO05D000129 6.1e-06 54.3 103 36.9
AL3G31620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.0e-06 53.9 105 35.2
Thhalv10002791m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.0e-06 53.9 84 41.7


User provided reference genes

Program Settings