Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-139 499.2 262 100.0
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-110 401.7 257 83.7
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-99 365.9 239 82.4
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-98 363.6 226 87.2
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 8.2e-98 360.9 248 77.4
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 5.3e-97 358.2 248 77.8
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 5.3e-97 358.2 248 77.8
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-96 357.1 248 77.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-96 356.7 257 76.3
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 7.7e-96 354.4 248 79.4
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 7.7e-96 354.4 248 79.4
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 2.1e-93 346.3 259 74.1
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-91 339.0 248 74.6
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-91 339.0 248 74.6
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 9.7e-91 337.4 248 74.6
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-87 326.2 248 73.4
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-86 322.0 218 80.3
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-84 317.0 255 71.0
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-84 316.6 266 69.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 9.1e-81 304.3 255 69.0
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-80 303.5 234 73.9
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-80 303.5 254 68.5
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 7.7e-80 301.2 208 80.3
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-79 299.7 205 78.5
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-78 296.6 251 68.5
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 4.2e-78 295.4 261 66.7
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 3.6e-77 292.4 251 68.1
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-77 292.4 251 68.1
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 6.1e-77 291.6 197 78.7
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-76 290.4 217 74.7
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-76 289.3 187 83.4
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 2.8e-74 282.7 248 65.7
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-73 280.0 249 65.1
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 5.3e-73 278.5 258 64.3
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 4.5e-72 275.4 233 68.2
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 5.9e-72 275.0 249 63.9
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 2.2e-71 273.1 255 63.9
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 2.6e-67 259.6 257 59.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 5.7e-67 258.5 257 61.5
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-66 256.1 157 85.4
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-65 254.2 181 77.3
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-63 247.3 182 75.8
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 6.5e-63 245.0 148 85.8
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-62 243.0 208 66.3
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 1.4e-60 237.3 248 57.7
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-58 229.6 216 64.4
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 4.8e-58 228.8 205 66.3
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 6.3e-58 228.4 258 55.8
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 3.1e-57 226.1 249 55.8
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 4.5e-56 222.2 178 70.2
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-55 221.1 149 77.2
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-55 220.7 129 88.4
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 2.9e-55 219.5 176 71.6
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-54 216.5 252 55.2
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-53 213.0 229 58.5
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 3.0e-52 209.5 237 55.7
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 4.0e-52 209.1 177 67.2
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 5.2e-52 208.8 143 78.3
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 8.9e-52 208.0 255 54.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-50 203.8 178 65.2
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 2.8e-50 203.0 178 65.2
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 4.9e-50 202.2 143 76.9
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 1.4e-49 200.7 169 68.6
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-49 199.5 134 76.9
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 2.0e-48 196.8 222 53.6
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.0e-47 194.5 235 54.9
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 2.9e-47 193.0 143 73.4
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-47 192.6 172 64.0
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 8.6e-47 191.4 237 53.2
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.3e-46 189.5 249 51.0
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-45 187.6 134 76.1
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 2.6e-43 179.9 261 49.4
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 2.9e-42 176.4 143 69.2
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 1.9e-41 173.7 252 48.8
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-41 173.3 177 62.1
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 4.1e-41 172.6 132 68.9
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 2.7e-40 169.9 262 49.6
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 7.8e-40 168.3 240 49.2
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-39 167.5 142 66.9
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-39 167.2 128 71.1
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 3.9e-39 166.0 262 46.9
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 8.6e-39 164.9 255 49.8
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 8.6e-39 164.9 160 60.0
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 8.6e-39 164.9 160 60.0
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-38 163.3 125 72.8
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 2.5e-38 163.3 181 56.4
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 5.6e-38 162.2 236 48.7
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 9.5e-38 161.4 268 44.0
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-37 161.0 170 58.8
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 4.7e-37 159.1 247 45.7
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 6.8e-36 155.2 248 46.8
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 2.0e-35 153.7 203 46.8
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 2.6e-35 153.3 244 47.5
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 4.4e-35 152.5 140 64.3
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 1.3e-34 151.0 217 46.5
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 6.4e-34 148.7 102 76.5
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 6.4e-34 148.7 142 64.1
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 1.4e-33 147.5 254 42.1
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 3.2e-33 146.4 116 72.4
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.2e-32 144.4 91 86.8
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-32 143.3 129 65.1
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 2.3e-31 140.2 144 61.1
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.3e-31 140.2 111 67.6
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 8.6e-31 138.3 153 52.9
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 2.5e-30 136.7 185 46.5
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 3.3e-30 136.3 193 49.2
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 9.5e-30 134.8 111 64.9
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.6e-29 134.0 138 60.9
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 3.6e-29 132.9 173 49.7
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 1.4e-28 131.0 111 63.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 1.4e-28 131.0 123 62.6
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 1.4e-28 131.0 111 63.1
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.2e-27 127.9 244 38.9
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 4.4e-27 125.9 264 42.8
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 1.3e-26 124.4 87 82.8
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 4.9e-26 122.5 225 43.1
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 8.3e-26 121.7 227 42.7
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 4.1e-25 119.4 200 42.0
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-25 119.4 160 45.6
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 5.4e-25 119.0 76 77.6
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 6.6e-23 112.1 168 48.2
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 8.6e-23 111.7 189 43.9
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 8.6e-23 111.7 196 40.3
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-21 107.5 248 37.5
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 8.9e-20 101.7 107 56.1
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 1.2e-19 101.3 223 42.2
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 1.2e-19 101.3 151 47.7
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-19 100.9 73 71.2
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 8.7e-15 85.1 87 56.3
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 1.3e-13 81.3 146 42.5
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 1.3e-13 81.3 123 47.2
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 6.2e-13 79.0 123 46.3
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 8.1e-13 78.6 151 39.7
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 1.1e-12 78.2 101 49.5
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 1.4e-12 77.8 123 45.5
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 1.8e-12 77.4 114 48.2
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 4.0e-12 76.3 194 36.1
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 1.2e-11 74.7 150 39.3
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 1.2e-11 74.7 65 60.0
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 2.0e-11 73.9 55 72.7
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 3.4e-11 73.2 65 58.5
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 9.9e-11 71.6 52 75.0
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 2.2e-10 70.5 156 35.9
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 4.9e-10 69.3 252 30.6
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 8.4e-10 68.6 252 30.2
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 3.2e-09 66.6 139 38.1
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 4.2e-09 66.2 139 38.1
A04p09670 Brassica napus HOM05D008277 ORTHO05D016104 2.7e-08 63.5 139 36.7
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.0e-07 61.6 74 50.0
BraA01t03007Z Brassica rapa HOM05D008277 ORTHO05D016104 1.3e-07 61.2 222 30.6
BraA05t21197Z Brassica rapa HOM05D008277 ORTHO05D016104 1.3e-07 61.2 245 30.2
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 1.7e-07 60.8 92 43.5
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 3.0e-07 60.1 88 44.3
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 3.9e-07 59.7 92 42.4
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 5.1e-07 59.3 92 42.4
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 5.1e-07 59.3 92 42.4
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 1.1e-06 58.2 92 42.4
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 1.1e-06 58.2 92 42.4
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 1.1e-06 58.2 92 42.4
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 1.1e-06 58.2 70 50.0
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 2.5e-06 57.0 83 43.4
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 4.3e-06 56.2 56 64.3
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 5.6e-06 55.8 131 33.6


User provided reference genes

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