Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45622 Brassica carinata HOM05D004624 ORTHO05D005357 9.3e-27 122.9 65 100.0
C06p33840 Brassica napus HOM05D004624 ORTHO05D005357 3.5e-26 120.9 65 98.5
BcaB03g15728 Brassica carinata HOM05D004624 ORTHO05D005357 3.3e-24 114.4 63 95.2
BraA07t30607Z Brassica rapa HOM05D004624 ORTHO05D005357 7.4e-24 113.2 69 91.3
Thhalv10019414m.g Eutrema salsugineum HOM05D004624 ORTHO05D005357 1.6e-23 112.1 60 96.7
Sp5g28970 Schrenkiella parvula HOM05D004624 ORTHO05D005357 6.2e-23 110.2 62 90.3
BcaC08g46798 Brassica carinata HOM05D004624 ORTHO05D005357 1.1e-22 109.4 62 90.3
C06p47930 Brassica napus HOM05D004624 ORTHO05D005357 1.1e-22 109.4 62 90.3
BolC6t39828H Brassica oleracea HOM05D004624 ORTHO05D005357 1.1e-22 109.4 62 90.3
BraA07t31513Z Brassica rapa HOM05D004624 ORTHO05D005357 2.4e-22 108.2 62 88.7
BcaB03g15084 Brassica carinata HOM05D004624 ORTHO05D005357 4.0e-22 107.5 60 91.7
THA.LOC109116606 Tarenaya hassleriana HOM05D004624 ORTHO05D005357 2.0e-21 105.1 59 91.5
AL6G43100 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 1.0e-20 102.8 59 88.1
AT4G09550 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 1.0e-20 102.8 59 88.1
CARHR260420 Cardamine hirsuta HOM05D004624 ORTHO05D005357 1.0e-20 102.8 59 88.1
Carub.0006s2800 Capsella rubella HOM05D004624 ORTHO05D005357 1.3e-20 102.4 59 88.1
AL2G33600 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 2.2e-20 101.7 59 86.4
AT1G73790 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 2.2e-20 101.7 59 86.4
CARHR066880 Cardamine hirsuta HOM05D004624 ORTHO05D005357 2.9e-20 101.3 62 83.9
GSVIVG01025772001 Vitis vinifera HOM05D004624 ORTHO05D005357 2.9e-20 101.3 59 88.1
Carub.0002s2054 Capsella rubella HOM05D004624 ORTHO05D005357 4.9e-20 100.5 59 84.7
Nitab4.5_0000021g0900 Nicotiana tabacum HOM05D004624 ORTHO05D005357 6.5e-20 100.1 62 82.3
Nitab4.5_0003447g0020 Nicotiana tabacum HOM05D004624 ORTHO05D005357 6.5e-20 100.1 62 82.3
Sp6g08080 Schrenkiella parvula HOM05D004624 ORTHO05D005357 6.5e-20 100.1 59 86.4
PGSC0003DMG400026480 Solanum tuberosum HOM05D004624 ORTHO05D005357 6.5e-20 100.1 62 82.3
PGR142G2854 Punica granatum HOM05D004624 ORTHO05D005357 8.4e-20 99.8 63 82.5
Cpa.g.sc116.84 Carica papaya HOM05D004624 ORTHO05D005357 1.1e-19 99.4 63 81.0
Sabra16G0036900 Salix brachista HOM05D004624 ORTHO05D005357 1.1e-19 99.4 62 82.3
Cfa010947 Carpinus fangiana HOM05D004624 ORTHO05D005357 1.4e-19 99.0 58 86.2
Peaxi162Scf00516g00035 Petunia axillaris HOM05D004624 ORTHO05D005357 1.4e-19 99.0 62 80.6
Gohir.A07G114500 Gossypium hirsutum HOM05D004624 ORTHO05D005357 1.9e-19 98.6 58 86.2
Lj4g0019310 Lotus japonicus HOM05D004624 ORTHO05D005357 1.9e-19 98.6 58 86.2
MD03G1113900 Malus domestica HOM05D004624 ORTHO05D005357 1.9e-19 98.6 58 84.5
RcHm_v2.0_Chr7g0222161 Rosa chinensis HOM05D004624 ORTHO05D005357 1.9e-19 98.6 60 81.7
vmacro08998 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 1.9e-19 98.6 58 86.2
vmacro17426 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 1.9e-19 98.6 58 86.2
Ciclev10010500m.g Citrus clementina HOM05D004624 ORTHO05D005357 2.5e-19 98.2 62 80.6
COL.COLO4_05868 Corchorus olitorius HOM05D004624 ORTHO05D005357 2.5e-19 98.2 62 82.3
Glyma.01G100100 Glycine max HOM05D004624 ORTHO05D005357 2.5e-19 98.2 58 86.2
Glyma.03G068900 Glycine max HOM05D004624 ORTHO05D005357 2.5e-19 98.2 58 86.2
Hma1.2p1_0223F.1_g094210 Hydrangea macrophylla HOM05D004624 ORTHO05D005357 2.5e-19 98.2 58 84.5
Lalb_Chr19g0128161 Lupinus albus HOM05D004624 ORTHO05D005357 2.5e-19 98.2 58 86.2
CSS0023921 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 3.2e-19 97.8 58 86.2
CSS0026932 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 3.2e-19 97.8 58 86.2
CSS0035187 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 3.2e-19 97.8 62 82.3
Gorai.001G127500 Gossypium raimondii HOM05D004624 ORTHO05D005357 3.2e-19 97.8 59 83.1
Gorai.008G288400 Gossypium raimondii HOM05D004624 ORTHO05D005357 3.2e-19 97.8 58 86.2
Lj1g0004051 Lotus japonicus HOM05D004624 ORTHO05D005357 3.2e-19 97.8 58 86.2
Duzib205G0906 Durio zibethinus HOM05D004624 ORTHO05D005357 4.2e-19 97.4 58 86.2
Eucgr.K01650 Eucalyptus grandis HOM05D004624 ORTHO05D005357 4.2e-19 97.4 58 84.5
Gohir.D07G118600 Gossypium hirsutum HOM05D004624 ORTHO05D005357 4.2e-19 97.4 58 84.5
Phvul.001G120800 Phaseolus vulgaris HOM05D004624 ORTHO05D005357 4.2e-19 97.4 59 83.1
QL07p012089 Quercus lobata HOM05D004624 ORTHO05D005357 4.2e-19 97.4 58 86.2
Aa31LG4G10460 Aethionema arabicum HOM05D004624 ORTHO05D005357 5.5e-19 97.1 59 81.4
Ah.13g077180 Amaranthus hybridus HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 82.8
CANSAT78G0048 Cannabis sativa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 59 83.1
CANSAT78G2147 Cannabis sativa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 59 83.1
AUR62018375 Chenopodium quinoa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 84.5
MELO3C008583.2 Cucumis melo HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 81.0
Dinv15634 Davidia involucrata HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 84.5
FvH4_5g29300 Fragaria vesca HOM05D004624 ORTHO05D005357 5.5e-19 97.1 60 80.0
FAN13G0550 Fragaria x ananassa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 60 80.0
FAN18G4513 Fragaria x ananassa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 60 80.0
Potri.016G034200 Populus trichocarpa HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 84.5
Sc13g0000990 Simmondsia chinensis HOM05D004624 ORTHO05D005357 5.5e-19 97.1 59 79.7
TWI74G0338 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 5.5e-19 97.1 58 84.5
Atru.chr12.1276 Acer truncatum HOM05D004624 ORTHO05D005357 7.1e-19 96.7 62 82.3
CsaV3_2G010390 Cucumis sativus L. HOM05D004624 ORTHO05D005357 7.1e-19 96.7 58 81.0
DCAR_020589 Daucus carota HOM05D004624 ORTHO05D005357 7.1e-19 96.7 62 80.6
HanXRQChr11g0352301 Helianthus annuus HOM05D004624 ORTHO05D005357 7.1e-19 96.7 58 84.5
Potri.006G035900 Populus trichocarpa HOM05D004624 ORTHO05D005357 7.1e-19 96.7 58 84.5
TWI53G0657 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 7.1e-19 96.7 58 84.5
CiPaw.10G042300 Carya illinoinensis HOM05D004624 ORTHO05D005357 9.3e-19 96.3 58 82.8
Gohir.D12G268300 Gossypium hirsutum HOM05D004624 ORTHO05D005357 9.3e-19 96.3 58 84.5
Prupe.8G075600 Prunus persica HOM05D004624 ORTHO05D005357 9.3e-19 96.3 58 84.5
Sopen03g028160 Solanum pennellii HOM05D004624 ORTHO05D005357 9.3e-19 96.3 62 80.6
arahy.Tifrunner.gnm1.ann1.QE2DSJ Arachis hypogaea HOM05D004624 ORTHO05D005357 1.2e-18 95.9 58 82.8
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 1.2e-18 95.9 58 82.8
Cc03_g11260 Coffea canephora HOM05D004624 ORTHO05D005357 1.2e-18 95.9 59 81.4
Manes.10G062600 Manihot esculenta HOM05D004624 ORTHO05D005357 1.2e-18 95.9 58 84.5
Rhsim13G0121200 Rhododendron simsii HOM05D004624 ORTHO05D005357 1.2e-18 95.9 58 82.8
Thecc.03G049000 Theobroma cacao HOM05D004624 ORTHO05D005357 1.2e-18 95.9 62 80.6
Haze_02997 Corylus avellana HOM05D004624 ORTHO05D005357 1.6e-18 95.5 58 82.8
Sabra06G0024000 Salix brachista HOM05D004624 ORTHO05D005357 1.6e-18 95.5 58 82.8
Sabra16G0054100 Salix brachista HOM05D004624 ORTHO05D005357 1.6e-18 95.5 62 80.6
TPR.G16719 Trifolium pratense HOM05D004624 ORTHO05D005357 1.6e-18 95.5 58 79.3
TAR633G0121 Trochodendron aralioides HOM05D004624 ORTHO05D005357 1.6e-18 95.5 62 74.2
CAN.G732.25 Capsicum annuum HOM05D004624 ORTHO05D005357 2.1e-18 95.1 57 82.5
Cfa019982 Carpinus fangiana HOM05D004624 ORTHO05D005357 2.1e-18 95.1 56 85.7
Haze_20251 Corylus avellana HOM05D004624 ORTHO05D005357 2.1e-18 95.1 56 85.7
Medtr2g008230 Medicago truncatula HOM05D004624 ORTHO05D005357 2.1e-18 95.1 58 81.0
Medtr4g124060 Medicago truncatula HOM05D004624 ORTHO05D005357 2.1e-18 95.1 58 81.0
Psat0s1206g0080 Pisum sativum HOM05D004624 ORTHO05D005357 2.1e-18 95.1 58 81.0
QL04p073121 Quercus lobata HOM05D004624 ORTHO05D005357 2.1e-18 95.1 55 89.1
arahy.Tifrunner.gnm1.ann1.Q8D3CZ Arachis hypogaea HOM05D004624 ORTHO05D005357 2.7e-18 94.7 58 81.0
ECA248G3900 Erigeron canadensis HOM05D004624 ORTHO05D005357 2.7e-18 94.7 58 82.8
TPR.G12609 Trifolium pratense HOM05D004624 ORTHO05D005357 2.7e-18 94.7 58 79.3
GSVIVG01021751001 Vitis vinifera HOM05D004624 ORTHO05D005357 2.7e-18 94.7 58 79.3
Ca_07684_v3 Cicer arietinum L. HOM05D004624 ORTHO05D005357 4.6e-18 94.0 58 81.0
FAN08G1983 Fragaria x ananassa HOM05D004624 ORTHO05D005357 4.6e-18 94.0 60 78.3
Nitab4.5_0002193g0050 Nicotiana tabacum HOM05D004624 ORTHO05D005357 4.6e-18 94.0 62 77.4
Nitab4.5_0006185g0060 Nicotiana tabacum HOM05D004624 ORTHO05D005357 4.6e-18 94.0 59 79.7
Sed0025002 Sechium edule HOM05D004624 ORTHO05D005357 4.6e-18 94.0 62 75.8
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 6.0e-18 93.6 56 83.9
DCAR_028787 Daucus carota HOM05D004624 ORTHO05D005357 6.0e-18 93.6 58 81.0
Nn7g37680 Nelumbo nucifera HOM05D004624 ORTHO05D005357 6.0e-18 93.6 58 79.3
SHI11762 Sapria himalayana HOM05D004624 ORTHO05D005357 6.0e-18 93.6 62 75.8
ClCG11G007400 Citrullus lanatus HOM05D004624 ORTHO05D005357 7.9e-18 93.2 58 79.3
Rhsim04G0113600 Rhododendron simsii HOM05D004624 ORTHO05D005357 7.9e-18 93.2 55 85.5
Aqoxy3G00212 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 1.0e-17 92.8 61 78.7
Nitab4.5_0000645g0040 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.0e-17 92.8 62 75.8
RcHm_v2.0_Chr1g0330241 Rosa chinensis HOM05D004624 ORTHO05D005357 1.0e-17 92.8 58 79.3
Manes.15G024800 Manihot esculenta HOM05D004624 ORTHO05D005357 1.3e-17 92.4 62 75.8
Cpa.g.sc883.1 Carica papaya HOM05D004624 ORTHO05D005357 1.8e-17 92.0 62 75.8
Lalb_Chr19g0128151 Lupinus albus HOM05D004624 ORTHO05D005357 1.8e-17 92.0 58 81.0
Migut.J01335 Erythranthe guttata HOM05D004624 ORTHO05D005357 2.3e-17 91.7 59 76.3
PSO063G3723 Papaver somniferum HOM05D004624 ORTHO05D005357 2.3e-17 91.7 58 77.6
ECA238G3634 Erigeron canadensis HOM05D000185 ORTHO05D000105 3.0e-17 91.3 58 77.6
Migut.J01336 Erythranthe guttata HOM05D004624 ORTHO05D005357 3.0e-17 91.3 59 74.6
Thecc.05G198400 Theobroma cacao HOM05D004624 ORTHO05D005357 3.0e-17 91.3 56 82.1
Aqoxy3G02929 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 3.9e-17 90.9 58 79.3
Nitab4.5_0006270g0030 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.9e-17 90.9 62 75.8
PSO541G4755 Papaver somniferum HOM05D004624 ORTHO05D005357 3.9e-17 90.9 58 77.6
PSO675G0528 Papaver somniferum HOM05D004624 ORTHO05D005357 3.9e-17 90.9 58 77.6
Peaxi162Scf00815g00038 Petunia axillaris HOM05D004624 ORTHO05D005357 6.7e-17 90.1 62 72.6
Sopen06g029060 Solanum pennellii HOM05D004624 ORTHO05D005357 6.7e-17 90.1 59 78.0
Migut.J01633 Erythranthe guttata HOM05D004624 ORTHO05D005357 8.7e-17 89.7 58 70.7
CAN.G65.122 Capsicum annuum HOM05D004624 ORTHO05D005357 1.5e-16 89.0 57 80.7
MBI17_g08328_MAGBIO Magnolia biondii HOM05D004624 ORTHO05D005357 3.3e-16 87.8 54 81.5
Actinidia05484 Actinidia chinensis HOM05D004624 ORTHO05D005357 4.3e-16 87.4 58 81.0
TAR627G0533 Trochodendron aralioides HOM05D004624 ORTHO05D005357 7.4e-16 86.7 60 71.7
CDE05G2943 Ceratophyllum demersum HOM05D004624 ORTHO05D005357 9.6e-16 86.3 58 72.4
EL10Ac4g09929 Beta vulgaris HOM05D004624 ORTHO05D005357 8.2e-15 83.2 55 76.4
AagrBONN_evm.TU.Sc2ySwM_340.447 Anthoceros agrestis HOM05D004624 ORTHO05D005357 1.2e-13 79.3 60 61.7
FvH4_2g13790 Fragaria vesca HOM05D004624 ORTHO05D005357 1.5e-13 79.0 58 69.0
FAN24G0569 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.5e-13 79.0 58 69.0
Atru.chr12.1164 Acer truncatum HOM05D004624 ORTHO05D005357 2.0e-13 78.6 44 88.6
Pp3c13_4560 Physcomitrium patens HOM05D004624 ORTHO05D005357 2.0e-13 78.6 59 69.5
unitig_746.g26892 Utricularia gibba HOM05D004624 ORTHO05D005357 2.0e-13 78.6 57 66.7
MD11G1133700 Malus domestica HOM05D004624 ORTHO05D005357 3.4e-13 77.8 40 95.0
Os03g0435900 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 3.4e-13 77.8 54 72.2
Os03g0824000 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 3.4e-13 77.8 54 72.2
Os11g0368172 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 3.4e-13 77.8 54 72.2
Solyc03g097400.1 Solanum lycopersicum HOM05D004624 ORTHO05D005357 3.4e-13 77.8 44 86.4
Pp3c12_8260 Physcomitrium patens HOM05D004624 ORTHO05D005357 7.6e-13 76.6 59 66.1
Zm00001eb062930 Zea mays HOM05D004624 ORTHO05D005357 1.0e-12 76.3 51 74.5
PRCOL_00005147 Prasinoderma coloniale HOM05D004624 ORTHO05D005357 5.0e-12 73.9 58 62.1
CBR_g23420 Chara braunii HOM05D004624 ORTHO05D005357 1.4e-11 72.4 59 57.6
SMO172G0211 Selaginella moellendorffii HOM05D004624 ORTHO05D005357 1.4e-11 72.4 51 68.6
Mapoly0109s0047 Marchantia polymorpha HOM05D004624 ORTHO05D005357 4.2e-11 70.9 59 59.3
SalBow6G5026 Salvia bowleyana HOM05D004624 ORTHO05D005357 1.2e-10 69.3 40 80.0
MCO02G029 Micromonas commoda HOM05D004624 ORTHO05D005357 1.6e-10 68.9 59 55.9
Solyc06g072690.3 Solanum lycopersicum HOM05D004624 ORTHO05D005357 3.5e-10 67.8 41 80.5
HPP92_018529 Vanilla planifolia HOM05D004624 ORTHO05D005357 6.1e-10 67.0 53 56.6
Lsat_1_v5_gn_1_43120 Lactuca sativa HOM05D004624 ORTHO05D005357 7.4e-08 60.1 32 90.6
Cre14.g610000 Chlamydomonas reinhardtii HOM05D004624 ORTHO05D005357 8.2e-07 56.6 52 46.2


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