Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45307 Brassica carinata HOM05D000325 ORTHO05D094595 4.4e-30 134.0 71 100.0
BcaC02g10194 Brassica carinata HOM05D003135 ORTHO05D003715 3.1e-23 111.3 70 85.7
A01p08590 Brassica napus HOM05D000325 ORTHO05D015252 2.9e-21 104.8 72 83.3
BcaC09g51729 Brassica carinata HOM05D000325 ORTHO05D015252 4.1e-20 100.9 72 81.9
C01p10060 Brassica napus HOM05D000325 ORTHO05D015252 4.1e-20 100.9 72 81.9
BolC1t00964H Brassica oleracea HOM05D000325 ORTHO05D015252 4.1e-20 100.9 72 81.9
BraA01t00810Z Brassica rapa HOM05D000325 ORTHO05D015252 7.0e-20 100.1 72 80.6
C06p29110 Brassica napus HOM05D000325 ORTHO05D000122 7.3e-17 90.1 63 77.8
Sp7g27320 Schrenkiella parvula HOM05D000325 ORTHO05D015252 3.1e-15 84.7 71 73.2
Carub.0007s1110 Capsella rubella HOM05D000325 ORTHO05D015252 8.3e-13 76.6 68 69.1
AL7G22950 Arabidopsis lyrata HOM05D000325 ORTHO05D015252 3.5e-11 71.2 69 66.7
CARHR237260 Cardamine hirsuta HOM05D000325 ORTHO05D015252 6.6e-10 67.0 68 61.8
BcaC08g44028 Brassica carinata HOM05D000325 ORTHO05D095445 1.1e-09 66.2 36 94.4
C09p59450 Brassica napus HOM05D000325 ORTHO05D039234 2.5e-09 65.1 36 91.7
BcaC06g33395 Brassica carinata HOM05D000325 ORTHO05D095478 3.3e-09 64.7 36 91.7
Thhalv10027451m.g Eutrema salsugineum HOM05D000325 ORTHO05D015252 7.3e-09 63.5 59 66.1


User provided reference genes

Program Settings