Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45204 Brassica carinata HOM05D000326 ORTHO05D093745 2.5e-27 124.8 66 100.0
BcaB03g11725 Brassica carinata HOM05D000326 ORTHO05D003748 1.2e-10 69.3 47 80.9
BcaC01g00769 Brassica carinata HOM05D000326 ORTHO05D003748 2.8e-10 68.2 47 78.7
C03p84080 Brassica napus HOM05D000326 ORTHO05D003748 2.8e-10 68.2 47 78.7
BolC3t20687H Brassica oleracea HOM05D000326 ORTHO05D003748 2.8e-10 68.2 47 78.7
Sp7g20400 Schrenkiella parvula HOM05D000326 ORTHO05D003748 2.8e-10 68.2 48 79.2
A08p15630 Brassica napus HOM05D000326 ORTHO05D003748 3.6e-10 67.8 47 78.7
BraA08t33543Z Brassica rapa HOM05D000326 ORTHO05D003748 3.6e-10 67.8 47 78.7
BcaC05g24979 Brassica carinata HOM05D000326 ORTHO05D003748 6.8e-09 63.5 44 77.3
AL6G47670 Arabidopsis lyrata HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
BcaB01g01773 Brassica carinata HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
A09p26600 Brassica napus HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
BraA09t38233Z Brassica rapa HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
CARHR253480 Cardamine hirsuta HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
Sp6g04810 Schrenkiella parvula HOM05D000326 ORTHO05D003748 9.8e-08 59.7 47 72.3
BcaC04g21261 Brassica carinata HOM05D000326 ORTHO05D003748 2.9e-07 58.2 47 70.2
C09p33720 Brassica napus HOM05D000326 ORTHO05D003748 2.9e-07 58.2 47 70.2
BolC9t56206H Brassica oleracea HOM05D000326 ORTHO05D003748 2.9e-07 58.2 47 70.2
Thhalv10028901m.g Eutrema salsugineum HOM05D000326 ORTHO05D003748 2.9e-07 58.2 47 70.2
AT4G05530 Arabidopsis thaliana HOM05D000326 ORTHO05D003748 3.7e-07 57.8 47 70.2
Aa31LG9G10000 Aethionema arabicum HOM05D000326 ORTHO05D003748 8.3e-07 56.6 47 68.1
Carub.0006s3199 Capsella rubella HOM05D000326 ORTHO05D003748 1.1e-06 56.2 47 68.1
Aqoxy1G04159 Aquilegia oxysepala HOM05D000326 ORTHO05D003748 4.1e-06 54.3 47 63.8
THA.LOC104813498 Tarenaya hassleriana HOM05D000326 ORTHO05D003748 5.4e-06 53.9 47 66.0
PSO017G5127 Papaver somniferum HOM05D000326 ORTHO05D003748 7.0e-06 53.5 47 61.7
PSO675G4503 Papaver somniferum HOM05D000326 ORTHO05D003748 7.0e-06 53.5 47 61.7
MBI19_g29452_MAGBIO Magnolia biondii HOM05D000326 ORTHO05D003748 9.2e-06 53.1 47 63.8
Oeu002754.1 Olea europaea HOM05D000326 ORTHO05D003748 9.2e-06 53.1 47 63.8
TAR626G1478 Trochodendron aralioides HOM05D000326 ORTHO05D003748 9.2e-06 53.1 47 59.6


User provided reference genes

Program Settings