Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 6.0e-175 617.5 326 100.0
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.7e-164 581.6 321 96.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 8.2e-164 580.5 321 95.6
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.8e-163 579.3 321 95.3
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 5.0e-161 571.2 321 94.1
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.8e-155 552.7 321 90.0
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 3.6e-151 538.5 321 86.9
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.8e-147 526.2 321 85.0
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 5.9e-146 521.2 321 84.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 5.2e-142 508.1 321 81.9
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 8.8e-142 507.3 324 81.2
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.0e-129 467.2 326 75.8
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 3.7e-124 448.7 323 73.4
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.4e-110 403.7 320 66.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 4.4e-109 398.7 316 66.1
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 5.7e-109 398.3 317 66.9
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.7e-108 396.7 320 64.7
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.9e-108 396.0 311 67.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 6.4e-108 394.8 320 67.5
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 6.4e-108 394.8 310 67.7
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 8.3e-108 394.4 320 66.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 8.3e-108 394.4 312 66.0
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 8.3e-108 394.4 319 65.5
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.4e-107 393.7 312 66.3
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 4.1e-107 392.1 315 65.1
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 5.4e-107 391.7 318 66.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 9.2e-107 391.0 312 65.7
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.2e-106 390.6 307 67.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.5e-106 389.0 319 64.3
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 2.1e-103 379.8 320 64.1
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.1e-103 379.8 310 65.8
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.8e-103 379.4 320 64.1
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.8e-103 379.4 316 64.2
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 4.7e-103 378.6 320 64.1
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.1e-102 377.5 310 64.5
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.8e-102 376.7 310 64.2
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 3.1e-102 375.9 314 65.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 3.1e-102 375.9 310 65.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 6.8e-102 374.8 316 63.9
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 6.8e-102 374.8 311 64.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 8.9e-102 374.4 319 61.1
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-101 374.0 320 61.9
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-101 374.0 320 61.9
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.2e-101 374.0 316 63.9
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 2.6e-101 372.9 320 63.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.4e-101 372.5 310 62.9
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 5.8e-101 371.7 316 63.6
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 7.5e-101 371.3 316 63.9
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.7e-100 370.2 316 62.7
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.7e-100 369.0 308 63.0
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 8.3e-100 367.9 319 60.5
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 8.3e-100 367.9 319 61.8
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-99 367.5 320 62.2
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.9e-99 366.7 319 61.4
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 1.9e-99 366.7 317 63.4
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.9e-99 366.7 310 61.6
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.9e-99 366.7 319 61.4
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.4e-99 366.3 324 61.1
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 3.2e-99 365.9 314 62.7
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 3.2e-99 365.9 310 61.6
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 5.4e-99 365.2 319 61.8
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 9.2e-99 364.4 314 63.7
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.0e-98 363.2 322 59.6
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.0e-98 363.2 322 59.6
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 4.6e-98 362.1 322 60.6
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.6e-98 362.1 316 61.1
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 4.6e-98 362.1 310 60.6
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 4.6e-98 362.1 310 60.6
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 6.0e-98 361.7 197 94.9
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 6.0e-98 361.7 321 60.7
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 5.0e-97 358.6 310 60.0
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 6.6e-97 358.2 310 61.0
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 6.6e-97 358.2 318 57.9
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.5e-96 357.1 320 62.8
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.5e-96 357.1 319 59.6
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.5e-96 356.3 316 61.4
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.3e-96 355.9 321 59.5
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 4.3e-96 355.5 313 60.4
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 9.5e-96 354.4 319 62.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.1e-95 353.2 316 60.8
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 2.1e-95 353.2 311 59.5
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 6.2e-95 351.7 319 58.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.4e-94 350.5 318 59.7
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.4e-94 350.5 322 60.2
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.3e-94 349.7 283 64.3
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 2.3e-94 349.7 318 59.7
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 5.2e-94 348.6 320 59.7
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 7.5e-93 344.7 326 58.0
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 3.7e-92 342.4 314 59.2
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 4.9e-92 342.0 314 59.2
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.4e-91 340.5 309 59.9
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 4.1e-91 339.0 313 57.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.6e-90 337.0 312 57.4
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 2.1e-90 336.7 321 56.7
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.5e-88 330.5 314 58.0
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 4.3e-88 328.9 308 56.8
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.4e-86 323.9 313 56.9
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 8.4e-84 314.7 311 57.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 4.1e-83 312.4 245 64.9
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 4.1e-83 312.4 319 55.2
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.7e-81 307.0 308 56.2
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 3.9e-81 305.8 316 52.8
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.9e-80 303.5 311 55.0
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.5e-80 303.1 313 55.9
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.7e-76 290.4 245 63.7
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 6.7e-65 251.9 331 42.6
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.1e-63 246.9 312 46.5
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 6.9e-62 241.9 331 43.5
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.1e-56 224.6 317 40.1
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.0e-44 184.9 245 43.7
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.4e-38 163.7 323 36.5
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.4e-35 154.5 326 31.0
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.9e-19 100.9 119 52.9
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 4.5e-13 79.7 87 50.6
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 3.8e-12 76.6 85 41.2
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 3.0e-09 67.0 180 27.8


User provided reference genes

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