Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45120 Brassica carinata HOM05D000313 ORTHO05D039164 6.9e-66 253.8 129 100.0
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-32 143.3 126 61.1
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-32 143.3 126 61.1
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-32 143.3 126 61.1
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-30 136.3 126 59.5
BcaC01g06195 Brassica carinata HOM05D016309 ORTHO05D021634 4.7e-30 134.8 89 80.9
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-30 134.8 126 58.7
A03p63800 Brassica napus HOM05D000255 ORTHO05D039164 1.0e-29 133.7 68 95.6
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-27 125.6 132 55.3
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-27 125.6 132 55.3
BcaC01g06198 Brassica carinata HOM05D016309 ORTHO05D000065 1.4e-26 123.2 64 90.6
BolC4t27405H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-21 105.1 122 50.0
BolC1t03816H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-20 100.5 122 48.4
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-19 98.6 92 58.7
C04p30210 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-18 97.1 109 48.6
BolC4t24553H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-18 97.1 109 48.6
A09p41280 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-18 95.5 137 41.6
A05p34160 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-18 94.7 109 47.7
BcaNung03376 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-16 88.6 68 61.8
BcaC05g25203 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-15 87.0 68 60.3
BcaB05g24116 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-15 86.7 94 51.1
BcaC07g40702 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-15 86.3 67 61.2
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-15 85.5 126 37.3
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-14 83.2 76 57.9
BolC4t24339H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-14 83.2 76 57.9
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-14 81.3 126 33.3
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-14 81.3 126 33.3
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-14 80.9 123 37.4
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-13 80.1 129 36.4
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-13 80.1 123 35.8
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-13 78.6 123 36.6
BcaC01g06199 Brassica carinata HOM05D016309 ORTHO05D021634 5.2e-13 78.2 48 81.2
C03p18180 Brassica napus HOM05D016309 ORTHO05D021634 5.2e-13 78.2 48 81.2
BolC3t14219H Brassica oleracea HOM05D016309 ORTHO05D021634 5.2e-13 78.2 48 81.2
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-13 77.8 123 35.0
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 8.9e-13 77.4 83 51.8
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-12 76.6 126 33.3
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-12 76.6 123 35.0
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-12 75.9 123 37.4
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-12 75.1 76 52.6
BolC2t09433H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-12 75.1 76 52.6
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-12 74.7 142 31.7
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 7.5e-12 74.3 123 33.3
A09p29710 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-12 74.3 77 51.9
BraA09t38537Z Brassica rapa HOM05D000313 ORTHO05D000065 7.5e-12 74.3 77 51.9
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-12 73.9 126 31.0
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-12 73.9 124 40.3
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-12 73.9 123 36.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-11 73.6 107 41.1
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-11 73.6 123 32.5
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-11 73.6 126 35.7
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-11 72.0 122 34.4
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-11 71.6 123 35.0
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-11 71.6 122 34.4
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-11 71.6 105 37.1
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 4.9e-11 71.6 122 34.4
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-11 71.2 128 34.4
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-11 71.2 128 34.4
BcaC07g38309 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-10 70.5 122 35.2
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 70.5 122 35.2
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-10 70.1 104 37.5
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-10 69.7 122 35.2
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 69.7 126 34.1
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 69.7 122 35.2
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-10 69.3 126 34.1
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-10 69.3 126 34.1
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-10 68.6 126 34.1
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-10 68.6 126 32.5
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-10 68.6 126 33.3
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-10 68.2 128 33.6
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 5.4e-10 68.2 132 33.3
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-10 67.8 128 32.8
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-10 67.8 128 33.6
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-10 67.4 128 33.6
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-10 67.4 127 33.1
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-10 67.4 128 33.6
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 9.2e-10 67.4 128 33.6
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.0 128 31.2
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 128 32.0
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-09 66.6 123 30.9
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-09 66.6 126 34.1
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-09 66.2 124 32.3
A10p11580 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 48 66.7
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 126 33.3
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 128 32.0
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-09 65.5 123 30.1
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-09 65.5 123 30.1
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-09 65.5 123 31.7
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 121 33.1
C03p52850 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 117 33.3
C07p20830 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 128 30.5
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-09 65.5 107 36.4
BolC5t31824H Brassica oleracea HOM05D000313 ORTHO05D000065 3.5e-09 65.5 126 32.5
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-09 65.5 123 33.3
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 4.6e-09 65.1 126 32.5
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-09 65.1 126 32.5
BraA06t24100Z Brassica rapa HOM05D000313 ORTHO05D000065 4.6e-09 65.1 126 31.7
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-09 64.7 124 31.5
C08p25290 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-09 64.7 123 30.1
BolC8t50151H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-09 64.7 123 30.1
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-09 64.3 123 29.3
C09p38910 Brassica napus HOM05D000313 ORTHO05D032045 7.8e-09 64.3 86 39.5
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-09 64.3 123 29.3
BolC9t56761H Brassica oleracea HOM05D000313 ORTHO05D032045 7.8e-09 64.3 86 39.5
C01p47570 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 63.9 104 36.5
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-08 63.5 126 31.7
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-08 63.5 135 32.6
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-08 63.2 128 32.0
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 63.2 128 32.0
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 62.8 128 31.2
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 62.8 128 30.5
C02p48770 Brassica napus HOM05D000285 ORTHO05D005607 2.3e-08 62.8 128 29.7
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-08 62.4 143 31.5
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-08 62.0 121 28.9
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-08 62.0 128 30.5
C02p32640 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-08 62.0 45 66.7
C07p23080 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-08 62.0 45 66.7
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-08 62.0 128 30.5
BcaC03g16977 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-08 61.6 121 32.2
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-08 61.6 129 31.8
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-08 61.2 128 30.5
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-08 61.2 128 30.5
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-08 61.2 126 31.0
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 6.6e-08 61.2 126 31.0
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-08 61.2 128 30.5
BolC9t54482H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-08 60.8 41 70.7
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.5 140 29.3
BcaB07g32742 Brassica carinata HOM05D000313 ORTHO05D027477 1.1e-07 60.5 46 69.6
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.5 128 30.5
BcaC01g05008 Brassica carinata HOM05D012652 ORTHO05D018584 1.5e-07 60.1 53 64.2
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 127 29.9
BcaC05g27722 Brassica carinata HOM05D012652 ORTHO05D018584 1.5e-07 60.1 53 64.2
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 128 29.7
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-07 60.1 128 29.7
C05p32080 Brassica napus HOM05D012652 ORTHO05D018584 1.5e-07 60.1 53 64.2
BolC5t31935H Brassica oleracea HOM05D012652 ORTHO05D018584 1.5e-07 60.1 53 64.2
BcaC09g48632 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.3 104 35.6
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.3 128 29.7
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 2.5e-07 59.3 127 29.1
BcaB01g02353 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-07 58.9 128 28.1
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-07 58.9 128 28.9
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-07 58.9 128 29.7
BolC1t04726H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-07 58.9 104 35.6
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 3.3e-07 58.9 112 34.8
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.5 128 29.7
C06p09070 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.5 107 33.6
BolC1t05664H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.5 126 31.0
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 5.6e-07 58.2 123 30.1
A07p11070 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 116 31.9
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-07 57.8 128 28.9
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 7.3e-07 57.8 128 28.9
C02p19990 Brassica napus HOM05D021655 ORTHO05D027207 9.5e-07 57.4 82 31.7
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 9.5e-07 57.4 126 28.6
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 9.5e-07 57.4 126 28.6
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 57.0 123 28.5
BraA01t02116Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 57.0 114 32.5
BraA07t29672Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 57.0 51 58.8
C03p69800 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 85 37.6
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 56.2 128 28.9
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 56.2 93 34.4
BraA09t40157Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-06 56.2 100 35.0
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 55.8 112 31.2
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 55.8 103 31.1
BraA09t36832Z Brassica rapa HOM05D012652 ORTHO05D000065 2.8e-06 55.8 56 57.1
C01p35450 Brassica napus HOM05D021655 ORTHO05D027572 4.7e-06 55.1 88 30.7
C02p42250 Brassica napus HOM05D021655 ORTHO05D027207 4.7e-06 55.1 82 30.5
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-06 55.1 120 31.7
BolC1t03503H Brassica oleracea HOM05D021655 ORTHO05D027572 4.7e-06 55.1 88 30.7
BolC2t10974H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-06 55.1 128 27.3
C03p67980 Brassica napus HOM05D048130 ORTHO05D040757 6.2e-06 54.7 87 37.9
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-06 54.7 38 68.4
BolC2t08719H Brassica oleracea HOM05D030079 ORTHO05D028288 8.1e-06 54.3 54 46.3
BolC5t33182H Brassica oleracea HOM05D030079 ORTHO05D028288 8.1e-06 54.3 54 46.3


User provided reference genes

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