Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45057 Brassica carinata HOM05D003007 ORTHO05D093451 8.2e-51 203.4 98 100.0
BcaB02g07419 Brassica carinata HOM05D003007 ORTHO05D003417 8.0e-22 107.1 53 96.2
BcaC08g45051 Brassica carinata HOM05D003007 ORTHO05D003417 8.0e-22 107.1 53 96.2
BcaB02g08168 Brassica carinata HOM05D003007 ORTHO05D003417 9.1e-18 93.6 54 75.9
Sp5g14680 Schrenkiella parvula HOM05D003007 ORTHO05D003417 2.9e-16 88.6 53 79.2
Sp5g02790 Schrenkiella parvula HOM05D003007 ORTHO05D003417 8.5e-16 87.0 53 77.4
BcaB02g07418 Brassica carinata HOM05D003007 ORTHO05D003417 2.1e-14 82.4 50 72.0
CARHR170780 Cardamine hirsuta HOM05D003007 ORTHO05D003417 2.1e-14 82.4 46 78.3
A04p01610 Brassica napus HOM05D003007 ORTHO05D003417 2.7e-14 82.0 45 80.0
C04p32150 Brassica napus HOM05D003007 ORTHO05D003417 8.0e-14 80.5 45 77.8
BolC4t24765H Brassica oleracea HOM05D003007 ORTHO05D003417 8.0e-14 80.5 45 77.8
BraA04t15885Z Brassica rapa HOM05D003007 ORTHO05D003417 8.0e-14 80.5 45 77.8
CARHR170790 Cardamine hirsuta HOM05D003007 ORTHO05D003417 8.0e-14 80.5 46 78.3
AT3G60440 Arabidopsis thaliana HOM05D003007 ORTHO05D003417 1.0e-13 80.1 49 73.5
BcaC08g45059 Brassica carinata HOM05D003007 ORTHO05D003417 1.4e-13 79.7 91 47.3
BolC6t37844H Brassica oleracea HOM05D003007 ORTHO05D003417 1.4e-13 79.7 91 47.3
BcaC02g10155 Brassica carinata HOM05D003007 ORTHO05D003417 2.3e-13 79.0 45 75.6
Thhalv10006148m.g Eutrema salsugineum HOM05D003007 ORTHO05D003417 2.3e-13 79.0 46 78.3
AL5G42330 Arabidopsis lyrata HOM05D003007 ORTHO05D003417 4.0e-13 78.2 52 75.0
Carub.0005s2716 Capsella rubella HOM05D003007 ORTHO05D003417 5.2e-13 77.8 46 76.1
A07p25070 Brassica napus HOM05D003007 ORTHO05D003417 9.8e-12 73.6 51 68.6
BraA07t30147Z Brassica rapa HOM05D003007 ORTHO05D003417 9.8e-12 73.6 51 68.6
BolC6t37830H Brassica oleracea HOM05D003007 ORTHO05D003417 8.3e-11 70.5 51 66.7
C06p26680 Brassica napus HOM05D003007 ORTHO05D003417 3.1e-10 68.6 51 64.7
Aa31LG10G14520 Aethionema arabicum HOM05D003007 ORTHO05D003417 2.0e-09 65.9 50 60.0
THA.LOC104802488 Tarenaya hassleriana HOM05D003007 ORTHO05D003417 3.8e-08 61.6 50 54.0
THA.LOC104817198 Tarenaya hassleriana HOM05D003007 ORTHO05D003417 2.5e-07 58.9 45 55.6
Thhalv10006161m.g Eutrema salsugineum HOM05D003007 ORTHO05D003417 1.2e-06 56.6 44 54.5
AT3G60450 Arabidopsis thaliana HOM05D003007 ORTHO05D003417 1.6e-06 56.2 44 52.3
AL5G42710 Arabidopsis lyrata HOM05D003007 ORTHO05D003417 2.1e-06 55.8 44 52.3
A07p25100 Brassica napus HOM05D000078 ORTHO05D000025 3.6e-06 55.1 23 100.0
BraA07t30150Z Brassica rapa HOM05D000078 ORTHO05D000025 3.6e-06 55.1 23 100.0
CARHR170800 Cardamine hirsuta HOM05D003007 ORTHO05D003417 4.7e-06 54.7 44 52.3


User provided reference genes

Program Settings