Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g45031 Brassica carinata HOM05D024565 ORTHO05D003452 3.7e-82 308.1 154 100.0
BcaC08g45032 Brassica carinata HOM05D024565 ORTHO05D003452 3.7e-82 308.1 154 100.0
BcaC08g45038 Brassica carinata HOM05D024565 ORTHO05D032400 1.9e-38 162.9 79 100.0
BcaC08g45027 Brassica carinata HOM05D024565 ORTHO05D032400 4.3e-38 161.8 79 98.7
BolC6t37822H Brassica oleracea HOM05D024565 ORTHO05D032400 2.7e-24 115.9 55 100.0
BcaC08g45026 Brassica carinata HOM05D003186 ORTHO05D003452 1.4e-17 93.6 104 58.7
C06p26570 Brassica napus HOM05D003186 ORTHO05D003452 1.4e-17 93.6 104 58.7
BolC6t37821H Brassica oleracea HOM05D003186 ORTHO05D003452 1.4e-17 93.6 104 58.7
A07p25000 Brassica napus HOM05D003186 ORTHO05D003452 1.0e-15 87.4 104 55.8
BraA07t30140Z Brassica rapa HOM05D003186 ORTHO05D003452 1.0e-15 87.4 104 55.8
BcaB02g07428 Brassica carinata HOM05D003186 ORTHO05D003452 8.7e-15 84.3 104 53.8
BcaC08g45035 Brassica carinata HOM05D003186 ORTHO05D003452 1.3e-13 80.5 39 100.0
Sp5g03010 Schrenkiella parvula HOM05D003186 ORTHO05D003452 3.6e-13 79.0 111 45.9
Thhalv10006502m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 4.5e-11 72.0 111 45.0
BcaB02g08186 Brassica carinata HOM05D003186 ORTHO05D003452 2.2e-10 69.7 39 84.6
BcaC02g10119 Brassica carinata HOM05D003186 ORTHO05D003452 2.2e-10 69.7 39 84.6
BolC4t24815H Brassica oleracea HOM05D003186 ORTHO05D003452 2.2e-10 69.7 39 84.6
BcaC07g40516 Brassica carinata HOM05D003186 ORTHO05D003452 2.9e-10 69.3 39 82.1
BcaC07g40522 Brassica carinata HOM05D003186 ORTHO05D003452 2.9e-10 69.3 39 82.1
C08p35230 Brassica napus HOM05D003186 ORTHO05D003452 2.9e-10 69.3 39 82.1
BolC8t51117H Brassica oleracea HOM05D003186 ORTHO05D003452 2.9e-10 69.3 39 82.1
A04p01780 Brassica napus HOM05D003186 ORTHO05D003452 6.4e-10 68.2 39 82.1
C04p32500 Brassica napus HOM05D003186 ORTHO05D003452 6.4e-10 68.2 39 82.1
BraA04t15902Z Brassica rapa HOM05D003186 ORTHO05D003452 6.4e-10 68.2 39 82.1
A09p52480 Brassica napus HOM05D003186 ORTHO05D003452 8.4e-10 67.8 39 79.5
BcaC07g40415 Brassica carinata HOM05D003186 ORTHO05D003452 2.4e-09 66.2 99 46.5
BraA09t40678Z Brassica rapa HOM05D003186 ORTHO05D003452 5.5e-09 65.1 100 45.0
Carub.0005s2694 Capsella rubella HOM05D003186 ORTHO05D003452 7.1e-09 64.7 39 82.1
AL5G42410 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 2.7e-08 62.8 40 85.0
AT3G60200 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 2.7e-08 62.8 40 85.0
CARHR170520 Cardamine hirsuta HOM05D003186 ORTHO05D003452 3.0e-07 59.3 40 80.0
Aa31LG10G14340 Aethionema arabicum HOM05D003186 ORTHO05D003452 6.7e-07 58.2 39 76.9


User provided reference genes

Program Settings