Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44915 Brassica carinata HOM05D004074 ORTHO05D004717 4.6e-38 160.6 75 100.0
BolC8t49078H Brassica oleracea HOM05D004074 ORTHO05D004717 9.4e-31 136.3 70 92.9
C06p25410 Brassica napus HOM05D004074 ORTHO05D004717 1.6e-30 135.6 63 100.0
BolC6t37702H Brassica oleracea HOM05D004074 ORTHO05D004717 1.6e-30 135.6 63 100.0
BcaC09g49057 Brassica carinata HOM05D004074 ORTHO05D004717 3.5e-25 117.9 65 80.0
BcaB04g19151 Brassica carinata HOM05D004074 ORTHO05D004717 7.7e-25 116.7 62 90.3
BcaC01g03518 Brassica carinata HOM05D004074 ORTHO05D004717 7.7e-25 116.7 62 90.3
BolC3t17439H Brassica oleracea HOM05D000606 ORTHO05D001265 7.7e-25 116.7 62 90.3
BraA03t13364Z Brassica rapa HOM05D000606 ORTHO05D001265 7.7e-25 116.7 62 90.3
Sp3g19200 Schrenkiella parvula HOM05D004074 ORTHO05D004717 5.0e-24 114.0 69 79.7
arahy.Tifrunner.gnm1.ann1.9ZAP4M Arachis hypogaea HOM05D004074 ORTHO05D004717 6.5e-24 113.6 70 72.9
A08p02600 Brassica napus HOM05D004074 ORTHO05D004717 8.5e-24 113.2 67 76.1
BraA08t32299Z Brassica rapa HOM05D004074 ORTHO05D004717 8.5e-24 113.2 67 76.1
A01p33680 Brassica napus HOM05D004074 ORTHO05D004717 1.9e-23 112.1 60 83.3
A05p19470 Brassica napus HOM05D004074 ORTHO05D004717 1.9e-23 112.1 69 78.3
BolC1t04251H Brassica oleracea HOM05D004074 ORTHO05D004717 1.9e-23 112.1 60 83.3
BraA05t20851Z Brassica rapa HOM05D004074 ORTHO05D004717 1.9e-23 112.1 69 78.3
BcaB02g11264 Brassica carinata HOM05D004074 ORTHO05D004717 3.2e-23 111.3 69 78.3
BcaC03g13642 Brassica carinata HOM05D000239 ORTHO05D004717 3.2e-23 111.3 62 88.7
C02p10320 Brassica napus HOM05D004074 ORTHO05D004717 3.2e-23 111.3 62 88.7
COL.COLO4_13992 Corchorus olitorius HOM05D004074 ORTHO05D004717 3.2e-23 111.3 69 73.9
C01p43050 Brassica napus HOM05D004074 ORTHO05D004717 4.2e-23 110.9 60 81.7
BraA01t03480Z Brassica rapa HOM05D004074 ORTHO05D004717 4.2e-23 110.9 60 81.7
CARHR097100 Cardamine hirsuta HOM05D004074 ORTHO05D004717 4.2e-23 110.9 62 85.5
BcaB04g20604 Brassica carinata HOM05D004074 ORTHO05D004717 5.5e-23 110.5 60 81.7
BcaNung05296 Brassica carinata HOM05D004074 ORTHO05D004717 5.5e-23 110.5 60 81.7
HanXRQChr10g0311531 Helianthus annuus HOM05D004074 ORTHO05D004717 5.5e-23 110.5 69 75.4
Psat7g263760 Pisum sativum HOM05D004074 ORTHO05D004717 5.5e-23 110.5 69 73.9
BcaB04g17185 Brassica carinata HOM05D004074 ORTHO05D004717 9.4e-23 109.8 69 75.4
CARHR041810 Cardamine hirsuta HOM05D004074 ORTHO05D004717 9.4e-23 109.8 69 76.8
ECA234G0987 Erigeron canadensis HOM05D004074 ORTHO05D004717 9.4e-23 109.8 64 79.7
Sopen12g024230 Solanum pennellii HOM05D004074 ORTHO05D004717 9.4e-23 109.8 69 73.9
FvH4_6g37330 Fragaria vesca HOM05D004074 ORTHO05D004717 1.2e-22 109.4 62 77.4
Phvul.008G255900 Phaseolus vulgaris HOM05D004074 ORTHO05D004717 1.2e-22 109.4 67 71.6
QL05p083316 Quercus lobata HOM05D004074 ORTHO05D004717 1.2e-22 109.4 62 79.0
TPR.G2285 Trifolium pratense HOM05D004074 ORTHO05D004717 1.2e-22 109.4 69 76.8
BcaC08g43926 Brassica carinata HOM05D004074 ORTHO05D004717 1.6e-22 109.0 69 76.8
C06p13180 Brassica napus HOM05D004074 ORTHO05D004717 1.6e-22 109.0 69 76.8
BolC6t36474H Brassica oleracea HOM05D004074 ORTHO05D004717 1.6e-22 109.0 69 76.8
Thhalv10021996m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 1.6e-22 109.0 62 82.3
FAN14G4331 Fragaria x ananassa HOM05D004074 ORTHO05D004717 1.6e-22 109.0 60 80.0
Sp1g38290 Schrenkiella parvula HOM05D004074 ORTHO05D004717 1.6e-22 109.0 69 75.4
Sed0005809 Sechium edule HOM05D004074 ORTHO05D004717 1.6e-22 109.0 62 82.3
PGSC0003DMG400028842 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.6e-22 109.0 69 72.5
Actinidia00635 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.1e-22 108.6 69 75.4
Actinidia25993 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.1e-22 108.6 69 75.4
Actinidia38792 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.1e-22 108.6 69 73.9
Lj3g0011227 Lotus japonicus HOM05D004074 ORTHO05D004717 2.1e-22 108.6 64 73.4
Nn5g30428 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.1e-22 108.6 68 70.6
Nn6g31693 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.1e-22 108.6 68 70.6
Nn8g40291 Nelumbo nucifera HOM05D004074 ORTHO05D004717 2.1e-22 108.6 68 70.6
Solyc12g055760.2 Solanum lycopersicum HOM05D004074 ORTHO05D004717 2.1e-22 108.6 69 72.5
Ciclev10026787m.g Citrus clementina HOM05D004074 ORTHO05D004717 2.7e-22 108.2 70 71.4
Gohir.A11G055200 Gossypium hirsutum HOM05D004074 ORTHO05D004717 2.7e-22 108.2 59 79.7
Gohir.D11G059000 Gossypium hirsutum HOM05D004074 ORTHO05D004717 2.7e-22 108.2 64 78.1
Gorai.007G063900 Gossypium raimondii HOM05D004074 ORTHO05D004717 2.7e-22 108.2 64 78.1
TWI77G0047 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 2.7e-22 108.2 67 70.1
AL1G59560 Arabidopsis lyrata HOM05D004074 ORTHO05D004717 3.6e-22 107.8 69 75.4
AT1G51650 Arabidopsis thaliana HOM05D004074 ORTHO05D004717 3.6e-22 107.8 69 75.4
Cpa.g.sc1009.1 Carica papaya HOM05D004074 ORTHO05D004717 3.6e-22 107.8 62 79.0
FAN02G0872 Fragaria x ananassa HOM05D004074 ORTHO05D004717 3.6e-22 107.8 62 75.8
FAN05G0051 Fragaria x ananassa HOM05D004074 ORTHO05D004717 3.6e-22 107.8 62 75.8
FAN09G3199 Fragaria x ananassa HOM05D004074 ORTHO05D004717 3.6e-22 107.8 62 75.8
HanXRQChr12g0359921 Helianthus annuus HOM05D004074 ORTHO05D004717 3.6e-22 107.8 64 76.6
vmacro18761 Vaccinium macrocarpon HOM05D004074 ORTHO05D004717 3.6e-22 107.8 65 73.8
ClCG09G001480 Citrullus lanatus HOM05D004074 ORTHO05D004717 4.7e-22 107.5 69 73.9
DCAR_007668 Daucus carota HOM05D004074 ORTHO05D004717 4.7e-22 107.5 64 73.4
Gohir.D12G001400 Gossypium hirsutum HOM05D004074 ORTHO05D004717 4.7e-22 107.5 62 79.0
Actinidia21867 Actinidia chinensis HOM05D004074 ORTHO05D004717 6.1e-22 107.1 69 72.5
Duzib147G0570 Durio zibethinus HOM05D004074 ORTHO05D004717 6.1e-22 107.1 64 75.0
Thhalv10011901m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 6.1e-22 107.1 69 73.9
Psat1g059640 Pisum sativum HOM05D004074 ORTHO05D004717 6.1e-22 107.1 69 73.9
Sabra10G0194600 Salix brachista HOM05D004074 ORTHO05D004717 6.1e-22 107.1 70 71.4
Solyc06g063220.3 Solanum lycopersicum HOM05D004074 ORTHO05D004717 6.1e-22 107.1 64 75.0
Sopen06g022670 Solanum pennellii HOM05D004074 ORTHO05D004717 6.1e-22 107.1 64 75.0
TWI53G1078 Tripterygium wilfordii HOM05D004074 ORTHO05D004717 6.1e-22 107.1 67 68.7
Haze_03743 Corylus avellana HOM05D004074 ORTHO05D004717 8.0e-22 106.7 66 71.2
Glyma.08G222900 Glycine max HOM05D004074 ORTHO05D004717 8.0e-22 106.7 63 73.0
Gorai.008G000800 Gossypium raimondii HOM05D004074 ORTHO05D004717 8.0e-22 106.7 62 79.0
Rhsim08G0247900 Rhododendron simsii HOM05D004074 ORTHO05D004717 8.0e-22 106.7 62 77.4
Carub.0001s4049 Capsella rubella HOM05D004074 ORTHO05D004717 1.0e-21 106.3 62 80.6
CAN.G790.25 Capsicum annuum HOM05D004074 ORTHO05D004717 1.0e-21 106.3 70 68.6
Gohir.A12G001600 Gossypium hirsutum HOM05D004074 ORTHO05D004717 1.0e-21 106.3 62 77.4
PGSC0003DMG402009187 Solanum tuberosum HOM05D004074 ORTHO05D004717 1.0e-21 106.3 69 69.6
Thecc.01G124200 Theobroma cacao HOM05D004074 ORTHO05D004717 1.0e-21 106.3 62 77.4
Ah.07g199420 Amaranthus hybridus HOM05D004074 ORTHO05D004717 1.4e-21 105.9 64 71.9
MD09G1158500 Malus domestica HOM05D004074 ORTHO05D004717 1.4e-21 105.9 67 70.1
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 1.4e-21 105.9 60 75.0
CSS0037999 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 62 75.8
CSS0039874 Camellia sinensis var. sinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 62 75.8
CiPaw.01G088100 Carya illinoinensis HOM05D004074 ORTHO05D004717 1.8e-21 105.5 69 71.0
CDE02G0689 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 1.8e-21 105.5 67 68.7
CsaV3_7G033840 Cucumis sativus L. HOM05D004074 ORTHO05D004717 1.8e-21 105.5 67 68.7
Glyma.07G003700 Glycine max HOM05D004074 ORTHO05D004717 1.8e-21 105.5 67 70.1
Actinidia31138 Actinidia chinensis HOM05D004074 ORTHO05D004717 2.3e-21 105.1 62 72.6
Aa31LG8G7900 Aethionema arabicum HOM05D004074 ORTHO05D004717 2.3e-21 105.1 70 71.4
MELO3C024297.2 Cucumis melo HOM05D004074 ORTHO05D004717 2.3e-21 105.1 69 71.0
Manes.05G195000 Manihot esculenta HOM05D004074 ORTHO05D004717 2.3e-21 105.1 69 71.0
Rhsim06G0076700 Rhododendron simsii HOM05D004074 ORTHO05D004717 2.3e-21 105.1 64 75.0
CDE05G2863 Ceratophyllum demersum HOM05D004074 ORTHO05D004717 3.0e-21 104.8 67 68.7
Duzib187G1118 Durio zibethinus HOM05D004074 ORTHO05D004717 3.0e-21 104.8 64 75.0
Lsat_1_v5_gn_4_88780 Lactuca sativa HOM05D004074 ORTHO05D004717 3.0e-21 104.8 64 75.0
Peaxi162Scf00038g02442 Petunia axillaris HOM05D004074 ORTHO05D004717 3.0e-21 104.8 62 74.2
QL05p083267 Quercus lobata HOM05D004074 ORTHO05D004717 3.0e-21 104.8 64 68.8
Hund11291 Selenicereus undatus HOM05D004074 ORTHO05D004717 3.0e-21 104.8 61 73.8
ATR0580G305 Amborella trichopoda HOM05D004074 ORTHO05D004717 3.9e-21 104.4 64 70.3
CAN.G1073.1 Capsicum annuum HOM05D004074 ORTHO05D004717 3.9e-21 104.4 62 74.2
Nitab4.5_0000357g0290 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.9e-21 104.4 62 74.2
Nitab4.5_0001691g0090 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.9e-21 104.4 62 74.2
Nitab4.5_0002885g0120 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.9e-21 104.4 62 74.2
Nitab4.5_0007548g0020 Nicotiana tabacum HOM05D004074 ORTHO05D004717 3.9e-21 104.4 69 69.6
Prupe.3G167500 Prunus persica HOM05D004074 ORTHO05D004717 3.9e-21 104.4 69 71.0
Cc01_g08930 Coffea canephora HOM05D004074 ORTHO05D004717 5.2e-21 104.0 69 71.0
Duzib264G1024 Durio zibethinus HOM05D004074 ORTHO05D004717 5.2e-21 104.0 64 73.4
PGR102G2231 Punica granatum HOM05D004074 ORTHO05D004717 5.2e-21 104.0 69 71.0
THA.LOC104821596 Tarenaya hassleriana HOM05D004074 ORTHO05D004717 5.2e-21 104.0 62 69.4
Nitab4.5_0008628g0040 Nicotiana tabacum HOM05D004074 ORTHO05D004717 6.7e-21 103.6 76 63.2
Zm00001eb161770 Zea mays HOM05D004074 ORTHO05D004717 6.7e-21 103.6 64 71.9
Zm00001eb357940 Zea mays HOM05D004074 ORTHO05D004717 6.7e-21 103.6 64 71.9
Medtr5g040610 Medicago truncatula HOM05D004074 ORTHO05D004717 8.8e-21 103.2 67 68.7
Nitab4.5_0002661g0050 Nicotiana tabacum HOM05D004074 ORTHO05D004717 8.8e-21 103.2 62 72.6
MBI04_g18036_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 1.1e-20 102.8 61 72.1
Hund14448 Selenicereus undatus HOM05D004074 ORTHO05D004717 1.1e-20 102.8 61 70.5
TAR626G1506 Trochodendron aralioides HOM05D004074 ORTHO05D004717 1.1e-20 102.8 61 72.1
Migut.I01175 Erythranthe guttata HOM05D004074 ORTHO05D004717 1.5e-20 102.4 60 71.7
Hma1.2p1_0039F.1_g024790 Hydrangea macrophylla HOM05D004074 ORTHO05D004717 1.5e-20 102.4 64 73.4
Aa31LG10G3130 Aethionema arabicum HOM05D004074 ORTHO05D004717 2.0e-20 102.1 62 77.4
CANSAT01G1956 Cannabis sativa HOM05D004074 ORTHO05D004717 2.0e-20 102.1 64 73.4
RcHm_v2.0_Chr2g0150171 Rosa chinensis HOM05D004074 ORTHO05D004717 2.0e-20 102.1 64 75.0
Dinv20359 Davidia involucrata HOM05D004074 ORTHO05D004717 2.6e-20 101.7 64 71.9
Lalb_Chr25g0278611 Lupinus albus HOM05D004074 ORTHO05D004717 2.6e-20 101.7 61 70.5
PGSC0003DMG400026508 Solanum tuberosum HOM05D004074 ORTHO05D004717 2.6e-20 101.7 62 71.0
HPP92_021730 Vanilla planifolia HOM05D004074 ORTHO05D004717 2.6e-20 101.7 61 70.5
EL10Ac5g12205 Beta vulgaris HOM05D004074 ORTHO05D004717 4.4e-20 100.9 60 71.7
Dinv37799 Davidia involucrata HOM05D004074 ORTHO05D004717 5.7e-20 100.5 64 71.9
unitig_748.g7476 Utricularia gibba HOM05D004074 ORTHO05D004717 5.7e-20 100.5 62 72.6
Oeu040350.2 Olea europaea HOM05D004074 ORTHO05D004717 7.4e-20 100.1 62 71.0
Sabra08G0005100 Salix brachista HOM05D004074 ORTHO05D004717 1.3e-19 99.4 66 69.7
Potri.008G008900 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.7e-19 99.0 62 72.6
Potri.010G250000 Populus trichocarpa HOM05D004074 ORTHO05D004717 1.7e-19 99.0 62 72.6
Os08g0250200 Oryza sativa ssp. japonica HOM05D004074 ORTHO05D004717 2.2e-19 98.6 64 67.2
Eucgr.F04009 Eucalyptus grandis HOM05D004074 ORTHO05D004717 2.8e-19 98.2 60 71.7
PSO170G4934 Papaver somniferum HOM05D004074 ORTHO05D004717 3.7e-19 97.8 66 66.7
PSO339G3796 Papaver somniferum HOM05D004074 ORTHO05D004717 3.7e-19 97.8 61 65.6
TAR383G0992 Trochodendron aralioides HOM05D004074 ORTHO05D004717 3.7e-19 97.8 61 67.2
SGA_v2.0_scaffold122G33290 Striga asiatica HOM05D004074 ORTHO05D004717 4.8e-19 97.4 61 70.5
Aqoxy7G03184 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 6.3e-19 97.1 64 71.9
AUR62018789 Chenopodium quinoa HOM05D004074 ORTHO05D004717 1.1e-18 96.3 57 73.7
unitig_32.g11555 Utricularia gibba HOM05D004074 ORTHO05D004717 1.1e-18 96.3 62 69.4
Aqoxy5G02869 Aquilegia oxysepala HOM05D004074 ORTHO05D004717 4.1e-18 94.4 60 68.3
SHI21232 Sapria himalayana HOM05D004074 ORTHO05D004717 4.1e-18 94.4 62 66.1
GSVIVG01037184001 Vitis vinifera HOM05D004074 ORTHO05D004717 9.1e-18 93.2 57 70.2
SGA_v2.0_scaffold71G24013 Striga asiatica HOM05D001270 ORTHO05D001099 2.6e-17 91.7 61 65.6
SEGI_28642 Sequoiadendron giganteum HOM05D004074 ORTHO05D004717 3.5e-17 91.3 62 61.3
SalBow6G5392 Salvia bowleyana HOM05D004074 ORTHO05D004717 3.8e-16 87.8 55 65.5
HPP92_021648 Vanilla planifolia HOM05D004074 ORTHO05D004717 2.5e-15 85.1 61 62.3
MBI14_g24286_MAGBIO Magnolia biondii HOM05D004074 ORTHO05D004717 5.5e-15 84.0 47 74.5
GSVIVG01037963001 Vitis vinifera HOM05D004074 ORTHO05D004717 5.5e-15 84.0 46 76.1
C02p45000 Brassica napus HOM05D000128 ORTHO05D000059 3.6e-14 81.3 46 89.1
AagrBONN_evm.TU.Sc2ySwM_117.3571 Anthoceros agrestis HOM05D004074 ORTHO05D004717 4.7e-14 80.9 60 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1495 Anthoceros agrestis HOM05D004074 ORTHO05D004717 2.3e-13 78.6 60 53.3
Lsat_1_v5_gn_5_137500 Lactuca sativa HOM05D001270 ORTHO05D001099 2.6e-12 75.1 47 74.5
Thhalv10022333m.g Eutrema salsugineum HOM05D004074 ORTHO05D004717 3.4e-12 74.7 62 62.9
SMO351G0623 Selaginella moellendorffii HOM05D004074 ORTHO05D004717 4.4e-12 74.3 57 47.4
Pp3c1_12120 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.2e-11 72.0 56 50.0
Pp3c2_24870 Physcomitrium patens HOM05D004074 ORTHO05D004717 2.2e-11 72.0 56 50.0
Mapoly0001s0230 Marchantia polymorpha HOM05D004074 ORTHO05D004717 2.8e-11 71.6 59 49.2
MCO11G253 Micromonas commoda HOM05D004074 ORTHO05D004717 8.3e-11 70.1 62 46.8
Pp3c1_10140 Physcomitrium patens HOM05D004074 ORTHO05D004717 1.4e-10 69.3 65 47.7
PSO455G0136 Papaver somniferum HOM05D004074 ORTHO05D004717 9.1e-10 66.6 61 54.1
Medtr4g005960 Medicago truncatula HOM05D004074 ORTHO05D004717 1.6e-09 65.9 53 58.5
PRCOL_00000946 Prasinoderma coloniale HOM05D004074 ORTHO05D004717 2.0e-09 65.5 50 54.0
Zm00001eb394860 Zea mays HOM05D004074 ORTHO05D004717 2.0e-09 65.5 47 59.6
Cre10.g420700 Chlamydomonas reinhardtii HOM05D004074 ORTHO05D004717 2.1e-06 55.5 50 42.0


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