Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 6.0e-65 250.8 133 100.0
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-61 237.7 129 96.1
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 2.3e-48 195.7 133 79.7
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-47 191.0 121 86.8
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-30 136.0 133 63.2
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.7e-27 126.3 133 54.1
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 3.8e-27 125.2 133 54.1
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 5.0e-27 124.8 133 54.1
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-26 123.2 131 55.7
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-26 121.7 133 55.6
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-26 121.7 133 55.6
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-25 117.9 133 53.4
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 1.0e-24 117.1 133 49.6
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-24 116.3 133 52.6
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 6.8e-24 114.4 110 56.4
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-23 112.5 135 54.1
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 3.7e-22 108.6 133 49.6
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 1.1e-21 107.1 122 48.4
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 1.1e-21 107.1 122 48.4
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 4.1e-21 105.1 131 48.9
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.7e-20 102.4 116 52.6
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-20 101.3 116 52.6
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 1.7e-19 99.8 133 51.9
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 3.8e-19 98.6 133 51.1
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 8.6e-19 97.4 101 53.5
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 2.5e-18 95.9 133 48.1
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 2.5e-18 95.9 133 46.6
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-18 94.7 133 46.6
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 2.8e-17 92.4 133 46.6
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-17 92.4 133 46.6
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-17 91.7 133 47.4
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-16 90.5 130 46.9
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.4e-16 90.1 118 47.5
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 1.8e-16 89.7 133 45.9
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 4.0e-16 88.6 131 41.2
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 5.2e-16 88.2 131 42.0
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 5.2e-16 88.2 128 47.7
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 5.2e-16 88.2 96 52.1
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.8e-16 87.8 128 46.1
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 8.9e-16 87.4 131 42.0
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-15 87.0 127 47.2
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 1.2e-15 87.0 96 52.1
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.2e-15 87.0 110 50.0
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 1.5e-15 86.7 118 46.6
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-15 86.3 133 45.1
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-15 85.9 131 41.2
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 2.8e-14 82.4 128 45.3
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-14 82.0 131 43.5
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 4.9e-14 81.6 96 50.0
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 6.3e-14 81.3 132 47.0
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 8.3e-14 80.9 131 43.5
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-13 80.5 128 43.8
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-13 79.0 131 42.7
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-13 78.6 128 43.0
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 4.1e-13 78.6 83 56.6
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 76.3 112 44.6
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-12 75.5 128 40.6
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 4.5e-12 75.1 134 42.5
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 4.5e-12 75.1 134 42.5
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 5.9e-12 74.7 129 41.1
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-12 74.3 127 42.5
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 7.8e-12 74.3 83 55.4
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 73.6 134 41.8
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 1.3e-11 73.6 133 40.6
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 2.9e-11 72.4 137 40.9
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 2.9e-11 72.4 118 43.2
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 3.9e-11 72.0 68 55.9
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-11 72.0 126 40.5
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 5.0e-11 71.6 134 41.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 5.0e-11 71.6 122 41.0
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-10 70.1 131 39.7
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 1.5e-10 70.1 127 38.6
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 1.9e-10 69.7 106 45.3
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.9e-10 69.7 125 40.0
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-10 68.2 121 43.0
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 5.6e-10 68.2 127 40.9
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 7.3e-10 67.8 90 47.8
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-10 67.4 121 42.1
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-10 67.4 117 41.9
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-10 67.4 127 37.8
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 1.2e-09 67.0 127 37.8
A05p21370 Brassica napus HOM05D015634 ORTHO05D021759 2.1e-09 66.2 134 39.6
BraA05t21045Z Brassica rapa HOM05D015634 ORTHO05D021759 2.1e-09 66.2 134 39.6
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-09 65.5 123 39.8
BcaB04g17612 Brassica carinata HOM05D000496 ORTHO05D090729 3.6e-09 65.5 129 38.8
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-09 64.3 110 42.7
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-09 64.3 133 36.8
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 63.9 68 48.5
BcaB07g33378 Brassica carinata HOM05D000496 ORTHO05D095967 2.3e-08 62.8 112 42.9
BcaNung03853 Brassica carinata HOM05D000496 ORTHO05D039941 3.1e-08 62.4 78 47.4
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 5.2e-08 61.6 117 37.6
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 131 35.9
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 133 36.8
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 60.5 111 40.5
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 60.1 88 44.3
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 1.5e-07 60.1 126 40.5
BolC8t47230H Brassica oleracea HOM05D000496 ORTHO05D039815 2.0e-07 59.7 102 43.1
BcaC07g37066 Brassica carinata HOM05D000496 ORTHO05D039815 2.6e-07 59.3 102 42.2
BolC3t17900H Brassica oleracea HOM05D000496 ORTHO05D039941 3.4e-07 58.9 74 52.7
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-07 58.5 142 35.2
BcaC02g08909 Brassica carinata HOM05D010392 ORTHO05D000411 5.8e-07 58.2 134 38.1
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-07 57.4 137 33.6
BcaC05g28479 Brassica carinata HOM05D023072 ORTHO05D000411 1.7e-06 56.6 120 41.7
BcaC05g28859 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-06 55.8 105 40.0
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 2.9e-06 55.8 68 48.5
BcaC02g10795 Brassica carinata HOM05D017621 ORTHO05D000411 3.7e-06 55.5 116 38.8
BcaC02g10796 Brassica carinata HOM05D017621 ORTHO05D091941 3.7e-06 55.5 116 38.8
BcaC05g27816 Brassica carinata HOM05D010392 ORTHO05D000411 4.9e-06 55.1 134 37.3
BcaC06g36712 Brassica carinata HOM05D000496 ORTHO05D032668 4.9e-06 55.1 146 34.9
BcaC02g08982 Brassica carinata HOM05D017621 ORTHO05D096350 6.4e-06 54.7 116 38.8
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 8.3e-06 54.3 134 38.8
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-06 54.3 102 40.2


User provided reference genes

Program Settings