Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44714 Brassica carinata HOM05D008266 ORTHO05D021591 5.3e-75 284.3 144 100.0
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 6.2e-47 191.0 117 83.8
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 7.8e-42 174.1 118 74.6
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 6.6e-41 171.0 118 73.7
BcaB01g00796 Brassica carinata HOM05D008266 ORTHO05D021591 5.6e-40 167.9 97 85.6
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-37 159.1 119 63.0
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 1.7e-25 119.8 118 53.4
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 1.5e-24 116.7 118 50.0
BcaC08g44331 Brassica carinata HOM05D008266 ORTHO05D000062 8.1e-23 110.9 118 49.2
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-22 110.2 111 52.3
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.6e-15 86.7 95 48.4
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-14 84.0 125 39.2
AL1G48130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-14 82.8 109 40.4
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 5.3e-14 81.6 127 37.0
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 1.5e-13 80.1 113 42.5
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 3.4e-13 79.0 68 50.0
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 4.5e-13 78.6 106 42.5
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 4.9e-12 75.1 70 48.6
C05p38710 Brassica napus HOM05D030699 ORTHO05D021591 4.9e-12 75.1 99 38.4
BolC4t22507H Brassica oleracea HOM05D001086 ORTHO05D009904 8.4e-12 74.3 117 38.5
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-11 73.9 118 38.1
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.1e-11 73.9 70 47.1
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 1.4e-11 73.6 115 36.5
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-11 73.6 104 39.4
C08p18580 Brassica napus HOM05D030699 ORTHO05D021591 2.4e-11 72.8 99 37.4
C01p36480 Brassica napus HOM05D030699 ORTHO05D021591 3.2e-11 72.4 99 37.4
BraA08t32231Z Brassica rapa HOM05D001086 ORTHO05D001112 3.2e-11 72.4 115 38.3
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.2e-11 72.0 114 35.1
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 9.3e-11 70.9 80 50.0
THA.LOC104798989 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.2e-10 70.5 125 33.6
BcaC04g21009 Brassica carinata HOM05D008266 ORTHO05D009904 1.6e-10 70.1 40 82.5
BcaC04g20587 Brassica carinata HOM05D008266 ORTHO05D000062 2.1e-10 69.7 80 48.8
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.7e-10 69.3 119 34.5
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.7e-10 69.3 104 42.3
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 3.5e-10 68.9 83 42.2
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.5e-10 68.9 104 41.3
BcaC03g17259 Brassica carinata HOM05D008266 ORTHO05D000062 4.6e-10 68.6 88 44.3
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 4.6e-10 68.6 128 35.9
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.0e-10 68.2 104 42.3
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.0e-10 68.2 121 38.8
BcaC01g03082 Brassica carinata HOM05D008266 ORTHO05D009904 7.9e-10 67.8 88 43.2
Sp7g07620 Schrenkiella parvula HOM05D008266 ORTHO05D009904 7.9e-10 67.8 108 38.9
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 1.0e-09 67.4 119 33.6
BolC2t08050H Brassica oleracea HOM05D008266 ORTHO05D000062 1.0e-09 67.4 67 43.3
BolC3t18806H Brassica oleracea HOM05D008266 ORTHO05D000062 1.0e-09 67.4 67 43.3
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.0e-09 67.4 93 37.6
Solyc04g039705.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 1.3e-09 67.0 109 34.9
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 1.3e-09 67.0 83 45.8
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.3e-09 67.0 103 42.7
BolC7t42130H Brassica oleracea HOM05D008266 ORTHO05D000062 1.8e-09 66.6 67 43.3
BcaC09g48783 Brassica carinata HOM05D008266 ORTHO05D000062 3.0e-09 65.9 67 43.3
BolC1t04557H Brassica oleracea HOM05D008266 ORTHO05D000062 3.0e-09 65.9 67 43.3
BolC2t10248H Brassica oleracea HOM05D008266 ORTHO05D000062 3.0e-09 65.9 67 41.8
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.0e-09 65.9 82 45.1
Solyc10g049777.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 3.9e-09 65.5 122 33.6
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 3.9e-09 65.5 125 32.8
Ca_13668_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000062 5.1e-09 65.1 107 34.6
BcaC07g37918 Brassica carinata HOM05D008266 ORTHO05D009904 6.7e-09 64.7 80 43.8
BcaC07g39552 Brassica carinata HOM05D008266 ORTHO05D000062 6.7e-09 64.7 121 38.8
BolC5t31567H Brassica oleracea HOM05D008266 ORTHO05D000062 8.7e-09 64.3 67 41.8
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 8.7e-09 64.3 106 39.6
SpUn1206_0010 Schrenkiella parvula HOM05D008266 ORTHO05D000062 8.7e-09 64.3 92 34.8
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-08 63.9 104 36.5
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-08 63.9 119 36.1
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.5e-08 63.5 93 35.5
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 1.5e-08 63.5 121 38.8
Ca_19138_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 1.5e-08 63.5 107 33.6
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-08 63.5 63 49.2
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.9e-08 63.2 73 41.1
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-08 62.8 93 34.4
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-08 62.8 116 33.6
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 2.5e-08 62.8 70 38.6
Ca_02478_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.3e-08 62.4 105 35.2
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 3.3e-08 62.4 135 33.3
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.3e-08 62.0 115 31.3
C06p15090 Brassica napus HOM05D008266 ORTHO05D000062 4.3e-08 62.0 67 41.8
BolC6t36685H Brassica oleracea HOM05D008266 ORTHO05D000062 4.3e-08 62.0 67 41.8
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.6e-08 61.6 94 34.0
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 7.4e-08 61.2 127 33.9
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 7.4e-08 61.2 121 31.4
Sp2g13780 Schrenkiella parvula HOM05D008266 ORTHO05D000062 7.4e-08 61.2 92 33.7
Aa31LG8G12280 Aethionema arabicum HOM05D001086 ORTHO05D009904 9.6e-08 60.8 116 32.8
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 9.6e-08 60.8 48 52.1
BolC3t20058H Brassica oleracea HOM05D008266 ORTHO05D000062 1.3e-07 60.5 67 40.3
TPR.G14753 Trifolium pratense HOM05D000107 ORTHO05D000062 1.3e-07 60.5 79 36.7
Ca_26934_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.6e-07 60.1 95 34.7
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-07 60.1 131 33.6
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-07 60.1 119 37.0
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.1e-07 59.7 116 31.9
Aa31sc259G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.1e-07 59.7 114 32.5
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 2.1e-07 59.7 142 32.4
PGSC0003DMG400003456 Solanum tuberosum HOM05D007844 ORTHO05D000062 2.1e-07 59.7 116 34.5
ECA246G0176 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.8e-07 59.3 59 49.2
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 2.8e-07 59.3 104 33.7
Sp4g06240 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.7e-07 58.9 58 44.8
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.8e-07 58.5 91 35.2
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-07 58.5 61 47.5
Sp5g18930 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.8e-07 58.5 106 35.8
SpUn0003_0170 Schrenkiella parvula HOM05D008266 ORTHO05D000062 4.8e-07 58.5 57 42.1
SpUn0054_0020 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.8e-07 58.5 106 35.8
TPR.G20799 Trifolium pratense HOM05D000107 ORTHO05D000062 4.8e-07 58.5 85 34.1
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.2e-07 58.2 73 37.0
COL.COLO4_36518 Corchorus olitorius HOM05D008266 ORTHO05D000062 6.2e-07 58.2 80 37.5
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 6.2e-07 58.2 94 36.2
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 6.2e-07 58.2 128 30.5
TWI59G1045 Tripterygium wilfordii HOM05D008266 ORTHO05D000062 8.1e-07 57.8 119 35.3
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.1e-06 57.4 116 31.9
ECA247G3969 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 57.4 119 31.9
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 117 33.3
BcaC02g08637 Brassica carinata HOM05D001086 ORTHO05D009904 1.4e-06 57.0 47 53.2
SHI19809 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-06 56.6 65 38.5
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-06 56.2 129 34.1
SHI41918 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-06 55.8 91 37.4
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 4.0e-06 55.5 70 32.9
TPR.G532 Trifolium pratense HOM05D000107 ORTHO05D000062 4.0e-06 55.5 97 39.2
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 5.3e-06 55.1 86 34.9
COL.COLO4_22692 Corchorus olitorius HOM05D025240 ORTHO05D019037 5.3e-06 55.1 71 35.2
COL.COLO4_37631 Corchorus olitorius HOM05D000107 ORTHO05D000062 5.3e-06 55.1 77 39.0
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 5.3e-06 55.1 117 29.9
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.9e-06 54.7 60 48.3
TPR.G14757 Trifolium pratense HOM05D000107 ORTHO05D000062 6.9e-06 54.7 113 30.1
SHI13501 Sapria himalayana HOM05D000107 ORTHO05D000062 9.0e-06 54.3 71 42.3


User provided reference genes

Program Settings