Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 8.3e-81 303.9 184 100.0
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.5e-31 139.0 99 79.8
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 1.0e-30 137.5 99 78.8
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.8e-30 136.7 317 36.6
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 3.0e-30 136.0 98 79.6
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 3.0e-30 136.0 98 79.6
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 4.3e-29 132.1 98 77.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 4.3e-29 132.1 98 77.6
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 3.7e-28 129.0 98 76.5
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-28 128.3 93 76.3
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 2.4e-27 126.3 320 35.3
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 2.4e-27 126.3 320 35.3
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 4.1e-27 125.6 430 31.4
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 3.8e-25 119.0 103 67.0
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-24 117.1 163 52.1
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.2e-23 114.0 410 30.5
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 5.1e-22 108.6 405 30.6
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.5e-21 107.1 362 36.2
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.3e-20 104.0 265 35.1
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 2.8e-20 102.8 141 60.3
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 2.8e-20 102.8 403 29.0
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 5.3e-19 98.6 55 89.1
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 5.3e-19 98.6 55 89.1
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 6.9e-19 98.2 158 56.3
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 6.9e-19 98.2 158 56.3
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 6.9e-19 98.2 413 29.1
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 2.0e-18 96.7 470 29.8
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 2.6e-18 96.3 55 87.3
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 3.4e-18 95.9 158 55.7
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 4.5e-18 95.5 55 87.3
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 7.7e-18 94.7 55 87.3
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 7.7e-18 94.7 55 87.3
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 7.7e-18 94.7 55 87.3
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 1.3e-17 94.0 233 35.2
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.7e-17 93.6 54 87.0
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.7e-17 93.6 54 87.0
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 2.2e-17 93.2 55 85.5
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 2.9e-17 92.8 55 85.5
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 3.8e-17 92.4 55 83.6
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 1.9e-16 90.1 65 70.8
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 1.9e-16 90.1 65 70.8
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 5.5e-16 88.6 105 52.4
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 7.2e-16 88.2 61 73.8
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 7.2e-16 88.2 81 61.7
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 9.4e-16 87.8 65 69.2
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-15 87.4 92 53.3
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 2.1e-15 86.7 201 35.3
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 2.7e-15 86.3 55 83.6
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 2.7e-15 86.3 98 56.1
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 3.6e-15 85.9 46 93.5
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 3.6e-15 85.9 46 93.5
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 4.7e-15 85.5 95 55.8
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-15 85.1 105 50.5
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-15 85.1 151 42.4
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 6.1e-15 85.1 89 56.2
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 6.1e-15 85.1 98 57.1
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.8e-14 83.6 89 55.1
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-14 83.2 89 55.1
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-14 83.2 89 55.1
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 3.9e-14 82.4 91 49.5
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 6.7e-14 81.6 300 29.0
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 8.8e-14 81.3 94 51.1
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 8.8e-14 81.3 89 53.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-13 80.9 91 52.7
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.5e-13 80.5 79 57.0
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 2.0e-13 80.1 98 54.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 2.0e-13 80.1 89 53.9
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.6e-13 79.7 72 59.7
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 2.6e-13 79.7 42 92.9
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 7.4e-13 78.2 383 30.5
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-13 77.8 91 50.5
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 1.3e-12 77.4 60 70.0
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 1.3e-12 77.4 47 80.9
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-12 77.0 94 50.0
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 1.7e-12 77.0 79 57.0
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.7e-12 77.0 94 50.0
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 2.8e-12 76.3 65 64.6
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 2.8e-12 76.3 84 53.6
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 4.8e-12 75.5 61 60.7
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 6.3e-12 75.1 40 90.0
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-12 75.1 97 46.4
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 6.3e-12 75.1 40 90.0
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 8.2e-12 74.7 92 50.0
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 8.2e-12 74.7 40 90.0
BcaC04g20468 Brassica carinata HOM05D007203 ORTHO05D094473 1.1e-11 74.3 68 67.6
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-11 74.3 96 46.9
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-11 74.3 96 46.9
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-11 73.9 79 55.7
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 1.4e-11 73.9 40 87.5
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-11 73.6 61 60.7
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.8e-11 73.6 61 60.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.8e-11 73.6 61 60.7
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.8e-11 73.6 95 46.3
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-11 73.2 91 48.4
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 4.1e-11 72.4 42 88.1
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-11 72.4 68 55.9
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 5.3e-11 72.0 92 50.0
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 9.1e-11 71.2 78 55.1
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 9.1e-11 71.2 80 51.2
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 9.1e-11 71.2 61 59.0
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-10 70.9 68 55.9
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-10 70.9 68 55.9
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-10 70.9 89 47.2
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 1.2e-10 70.9 66 63.6
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 1.6e-10 70.5 82 53.7
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 2.0e-10 70.1 96 46.9
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.6e-10 69.7 78 52.6
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-09 67.8 102 43.1
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-09 67.8 65 55.4
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 1.7e-09 67.0 51 66.7
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-09 67.0 68 54.4
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 8.5e-09 64.7 54 61.1
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 1.1e-08 64.3 84 50.0
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-08 63.9 86 47.7
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 2.5e-08 63.2 82 43.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 4.2e-08 62.4 51 56.9
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 5.5e-08 62.0 87 50.6
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 5.5e-08 62.0 87 50.6
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 5.5e-08 62.0 79 48.1
C01p15990 Brassica napus HOM05D007203 ORTHO05D011558 7.2e-08 61.6 54 61.1
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 9.4e-08 61.2 57 57.9
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 9.4e-08 61.2 57 57.9
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 1.2e-07 60.8 50 62.0
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-07 59.7 80 48.8
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 6.1e-07 58.5 86 48.8
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 8.0e-07 58.2 68 50.0
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 1.8e-06 57.0 63 52.4
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 5.2e-06 55.5 72 52.8
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 6.7e-06 55.1 67 47.8


User provided reference genes

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