Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 3.1e-113 411.8 202 100.0
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 3.1e-113 411.8 202 100.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 3.1e-113 411.8 202 100.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.6e-109 399.4 202 97.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 2.1e-109 399.1 202 97.0
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.9e-100 368.2 202 88.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 8.8e-100 367.1 202 87.1
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.5e-99 366.3 202 88.1
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.6e-99 365.5 202 86.1
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 6.3e-98 360.9 202 85.1
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 8.5e-95 350.5 202 82.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.5e-83 313.2 209 74.2
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 6.6e-71 271.2 206 63.1
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 2.8e-61 239.2 208 55.8
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.3e-58 230.3 210 54.3
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 3.7e-58 228.8 208 52.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.1e-57 227.3 209 53.1
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.4e-57 226.1 208 54.8
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.4e-57 226.1 207 54.1
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 5.4e-57 224.9 212 51.9
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 5.4e-57 224.9 202 55.0
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 7.1e-57 224.6 214 53.7
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 7.1e-57 224.6 208 52.4
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 7.1e-57 224.6 217 53.0
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.1e-56 223.0 214 51.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.1e-56 223.0 214 54.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.7e-56 222.6 215 50.2
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 4.6e-56 221.9 209 53.1
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 1.0e-55 220.7 213 51.6
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.7e-55 219.9 216 51.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.9e-55 218.8 206 51.9
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 5.1e-55 218.4 208 52.9
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 5.1e-55 218.4 208 51.4
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 6.6e-55 218.0 208 53.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.6e-55 217.6 206 51.9
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.1e-54 217.2 213 49.8
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.1e-54 217.2 210 52.4
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.1e-54 217.2 206 51.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.5e-54 216.9 206 51.5
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.5e-54 216.9 206 51.0
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.9e-54 216.5 208 52.4
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 1.9e-54 216.5 208 52.9
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.5e-54 216.1 204 52.5
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 2.5e-54 216.1 202 53.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 3.3e-54 215.7 210 52.4
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 5.6e-54 214.9 217 49.8
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 7.3e-54 214.5 215 51.2
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 9.5e-54 214.2 216 50.0
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 9.5e-54 214.2 208 53.8
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 9.5e-54 214.2 206 50.5
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.2e-53 213.8 207 48.8
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.2e-53 213.8 215 49.3
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.8e-53 212.6 208 52.4
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.8e-53 212.6 209 52.6
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 4.7e-53 211.8 201 50.7
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 4.7e-53 211.8 214 48.6
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.2e-53 211.5 215 49.3
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.4e-52 210.3 208 51.9
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 3.1e-52 209.1 215 49.8
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.1e-52 209.1 215 49.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 3.1e-52 209.1 206 50.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 3.1e-52 209.1 216 49.5
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 4.0e-52 208.8 208 50.0
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 5.2e-52 208.4 206 50.5
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 6.8e-52 208.0 215 50.7
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-51 206.5 211 49.3
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 2.0e-51 206.5 204 50.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 4.4e-51 205.3 209 48.3
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 7.6e-51 204.5 200 52.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 7.6e-51 204.5 211 51.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 7.6e-51 204.5 211 51.2
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 7.6e-51 204.5 214 53.7
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 7.6e-51 204.5 217 47.9
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 9.9e-51 204.1 203 51.2
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.3e-50 203.8 211 48.8
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.7e-50 203.4 209 47.8
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 2.2e-50 203.0 213 49.8
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.9e-50 201.8 211 48.3
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 6.4e-50 201.4 213 49.3
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 8.3e-50 201.1 210 46.7
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 3.2e-49 199.1 220 47.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 2.1e-48 196.4 188 53.2
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 2.7e-48 196.1 208 51.4
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 3.5e-48 195.7 206 50.0
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.5e-48 195.7 206 49.0
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 6.0e-48 194.9 204 46.6
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 7.8e-48 194.5 175 54.3
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.3e-47 193.0 207 51.7
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 6.6e-47 191.4 207 48.8
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.9e-46 189.9 208 49.0
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 5.6e-46 188.3 170 55.3
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.4e-44 183.0 198 48.0
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.1e-44 182.6 214 46.7
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 7.6e-43 177.9 220 43.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.8e-42 175.6 222 44.1
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.2e-41 172.6 194 47.4
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.3e-38 162.5 214 42.1
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.4e-36 157.1 209 40.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 3.4e-35 152.5 213 40.4
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 3.8e-34 149.1 222 39.2
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.1e-28 131.0 180 41.1
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.5e-22 110.5 160 36.2
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 4.5e-19 99.0 216 28.2
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 5.8e-19 98.6 246 27.2
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.5e-11 73.9 94 38.3


User provided reference genes

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