Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 6.1e-146 520.8 260 100.0
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 9.8e-144 513.5 260 98.8
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 1.3e-143 513.1 260 98.8
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 4.3e-139 498.0 262 96.6
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 1.2e-138 496.5 262 96.2
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 3.4e-136 488.4 262 95.0
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 2.9e-127 458.8 268 89.2
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 2.9e-127 458.8 268 89.2
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 6.4e-127 457.6 268 88.1
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 5.4e-126 454.5 269 88.1
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 2.7e-125 452.2 269 87.7
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 6.0e-125 451.1 270 87.0
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 5.2e-121 438.0 280 81.4
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 8.9e-121 437.2 274 82.8
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 4.4e-120 434.9 274 81.4
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 7.5e-120 434.1 275 82.2
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 3.7e-119 431.8 273 81.3
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 1.6e-117 426.4 274 79.9
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 1.4e-105 386.7 260 75.4
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 3.9e-100 368.6 242 79.3
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 6.7e-92 341.3 276 62.0
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.5e-91 340.1 261 65.9
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 2.5e-91 339.3 261 65.9
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 3.3e-91 339.0 276 63.0
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.4e-89 332.8 276 62.7
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 3.1e-89 332.4 276 62.7
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 1.5e-88 330.1 274 62.4
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 3.4e-88 328.9 262 63.4
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.5e-88 328.6 260 65.0
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 5.8e-88 328.2 278 61.2
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 1.7e-87 326.6 273 62.3
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 2.9e-87 325.9 276 59.4
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 3.8e-87 325.5 200 77.0
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.1e-86 323.9 274 61.3
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 1.1e-86 323.9 274 61.7
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 1.4e-86 323.6 267 60.7
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 2.4e-86 322.8 276 60.5
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 3.2e-86 322.4 283 58.7
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 5.5e-86 321.6 277 59.9
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 5.5e-86 321.6 272 59.2
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 9.3e-86 320.9 274 60.6
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 9.3e-86 320.9 273 60.8
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.6e-85 320.1 274 60.9
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 2.7e-85 319.3 277 59.9
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 2.7e-85 319.3 270 61.1
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 3.5e-85 318.9 269 59.9
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 3.5e-85 318.9 278 60.4
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 6.0e-85 318.2 274 60.6
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 7.9e-85 317.8 276 59.4
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 7.9e-85 317.8 270 60.7
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 1.0e-84 317.4 275 61.1
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 3.0e-84 315.8 276 59.8
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 3.0e-84 315.8 270 60.4
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.1e-84 315.1 276 58.3
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 5.1e-84 315.1 279 59.1
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 5.1e-84 315.1 273 59.3
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 1.5e-83 313.5 274 59.1
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 1.9e-83 313.2 275 59.3
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 3.3e-83 312.4 274 60.2
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 4.3e-83 312.0 277 57.4
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 4.3e-83 312.0 274 60.6
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 1.6e-82 310.1 267 59.6
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 3.7e-82 308.9 276 56.9
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 1.1e-81 307.4 271 58.7
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 1.8e-81 306.6 273 56.4
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 9.0e-81 304.3 282 55.3
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 1.2e-80 303.9 285 55.8
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 2.0e-80 303.1 269 55.8
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 4.5e-80 302.0 272 57.4
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 2.2e-79 299.7 273 53.8
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 2.9e-79 299.3 279 57.0
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 4.9e-79 298.5 274 58.8
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 4.9e-79 298.5 266 55.3
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 8.4e-79 297.7 266 54.9
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.1e-78 297.4 258 60.1
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 2.5e-78 296.2 185 76.8
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 2.5e-78 296.2 203 69.5
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 3.2e-78 295.8 256 58.6
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 5.5e-78 295.0 272 56.2
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 7.1e-78 294.7 273 54.9
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 1.2e-77 293.9 270 55.2
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 8.7e-76 287.7 276 55.1
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 8.7e-76 287.7 272 51.1
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 1.1e-75 287.3 330 49.1
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 1.1e-75 287.3 271 54.2
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.5e-75 287.0 292 53.1
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.9e-75 286.6 209 67.5
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 4.3e-75 285.4 208 67.3
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 5.7e-75 285.0 271 55.0
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-74 283.9 258 56.6
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 2.1e-74 283.1 279 52.0
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 3.7e-74 282.3 272 54.0
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 3.7e-74 282.3 275 53.8
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 1.1e-73 280.8 284 52.5
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 6.9e-73 278.1 292 51.0
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 9.0e-73 277.7 275 53.5
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 5.9e-72 275.0 258 54.7
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 7.6e-72 274.6 193 67.9
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 8.5e-71 271.2 260 52.3
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 8.5e-71 271.2 303 49.8
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.9e-70 270.0 255 56.9
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 1.9e-70 270.0 210 62.9
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 2.5e-70 269.6 280 53.6
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 3.2e-70 269.2 272 52.6
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 9.3e-70 267.7 213 60.6
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.6e-69 266.9 184 69.0
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 2.1e-69 266.5 210 59.5
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 2.7e-69 266.2 278 50.7
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 1.8e-68 263.5 264 48.9
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 1.1e-67 260.8 280 50.0
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 7.4e-67 258.1 280 48.2
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 1.7e-66 256.9 294 50.0
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 3.7e-66 255.8 209 60.3
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.0e-64 250.0 255 54.5
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 1.3e-63 247.3 216 58.3
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.7e-63 246.9 206 63.1
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 3.2e-62 242.7 190 62.1
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.1e-59 234.2 208 57.7
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.8e-57 226.9 220 50.5
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.8e-57 226.9 161 67.7
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 3.1e-57 226.1 220 51.8
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 4.1e-57 225.7 204 58.3
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.2e-53 214.2 214 53.7
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 6.1e-53 211.8 112 93.8
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 6.7e-52 208.4 116 89.7
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.1e-49 201.1 213 51.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 3.5e-48 196.1 224 51.8
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 1.5e-43 180.6 280 38.9
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 7.0e-41 171.8 236 39.4
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 7.0e-41 171.8 114 71.9
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 2.0e-35 153.7 211 38.9
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 5.0e-31 139.0 108 66.7
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.5e-30 137.5 96 69.8
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 7.2e-30 135.2 135 54.1
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 2.1e-29 133.7 191 44.5
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 8.0e-29 131.7 268 31.3
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.8e-26 123.2 84 67.9
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 4.7e-21 105.9 91 53.8
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 2.3e-20 103.6 120 41.7
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 2.3e-20 103.6 129 40.3
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 6.6e-15 85.5 69 58.0
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 1.5e-14 84.3 197 27.4
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 1.9e-14 84.0 261 31.0
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 8.0e-13 78.6 71 47.9
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 2.3e-12 77.0 194 33.0
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.4e-09 67.8 44 70.5
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 3.2e-09 66.6 106 37.7
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 1.6e-08 64.3 84 40.5
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 2.7e-08 63.5 56 55.4
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 4.6e-08 62.8 48 66.7
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 1.3e-07 61.2 106 32.1
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 7.3e-06 55.5 64 53.1


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