Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 8.8e-179 630.2 320 100.0
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.8e-176 622.5 320 99.1
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.8e-176 622.5 320 99.1
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 3.8e-174 614.8 320 97.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.6e-172 609.4 320 96.2
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.1e-172 609.0 320 96.2
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 1.3e-169 599.7 320 95.0
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 8.3e-169 597.0 320 93.8
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.1e-168 596.7 320 94.4
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 5.4e-168 594.3 320 93.8
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.7e-167 592.0 320 93.8
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 5.9e-167 590.9 320 93.8
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 9.5e-165 583.6 320 91.9
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.1e-147 526.9 317 82.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 4.0e-147 525.0 320 81.9
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 5.2e-147 524.6 320 80.9
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 8.9e-147 523.9 320 80.9
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.5e-146 523.1 320 80.9
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 8.3e-145 517.3 320 80.9
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 80.3
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 80.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.6e-143 513.1 320 80.3
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.5e-143 511.9 320 79.4
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.9e-142 508.4 320 79.1
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.6e-142 507.3 319 79.3
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.1e-141 506.9 320 78.8
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.5e-141 506.5 320 78.8
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.5e-141 505.8 320 78.8
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 3.3e-141 505.4 320 78.8
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.2e-140 503.4 320 78.4
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 3.6e-140 501.9 322 78.3
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.8e-139 499.6 320 76.9
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 2.0e-138 496.1 320 78.4
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 3.8e-137 491.9 320 75.6
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 6.4e-137 491.1 321 77.9
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 3.2e-136 488.8 327 74.0
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 5.4e-136 488.0 322 75.5
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 7.1e-136 487.6 322 75.8
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 9.2e-136 487.3 326 76.7
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.6e-135 486.5 320 76.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.6e-135 486.5 320 76.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.1e-135 486.1 328 74.7
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.5e-135 485.3 320 76.2
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.5e-135 485.3 320 76.2
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 4.6e-135 485.0 327 74.3
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 6.0e-135 484.6 320 75.9
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.3e-134 483.4 324 74.4
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.7e-134 483.0 327 74.0
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 3.0e-134 482.3 323 74.0
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 3.9e-134 481.9 321 76.0
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 6.6e-134 481.1 327 74.3
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 6.6e-134 481.1 320 75.3
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 8.6e-134 480.7 323 74.0
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 1.9e-133 479.6 320 74.4
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.3e-133 478.8 323 74.9
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 5.6e-133 478.0 320 74.1
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 1.6e-132 476.5 326 74.5
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 2.1e-132 476.1 320 74.4
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.6e-132 475.3 320 72.8
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 3.6e-132 475.3 328 72.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 6.2e-132 474.6 320 72.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.4e-131 473.4 323 74.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.4e-131 473.4 321 73.5
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.8e-131 473.0 320 73.1
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.8e-131 473.0 320 73.1
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.0e-131 471.9 318 75.2
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 6.9e-131 471.1 328 71.6
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 8.9e-131 470.7 324 71.9
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 1.5e-130 469.9 328 70.1
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.6e-130 469.2 328 71.3
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 4.4e-130 468.4 321 72.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 5.8e-130 468.0 328 70.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.2e-129 466.1 325 72.0
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 3.8e-129 465.3 328 70.4
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 3.0e-126 455.7 320 70.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-125 453.0 318 73.3
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 2.5e-125 452.6 258 89.9
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.1e-124 449.5 317 71.3
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-123 446.0 300 76.0
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.5e-122 443.4 327 69.4
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.0e-122 443.0 300 75.0
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-118 429.9 303 69.6
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 5.1e-118 428.3 320 67.5
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.7e-118 427.6 305 73.1
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 5.8e-114 414.8 320 65.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 9.9e-114 414.1 317 65.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.2e-113 412.9 318 65.4
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 5.5e-112 408.3 320 64.4
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.2e-111 407.1 293 68.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 7.9e-111 404.4 320 63.8
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 6.7e-110 401.4 320 64.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.7e-110 401.4 258 79.5
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 9.6e-109 397.5 319 62.7
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 3.8e-105 385.6 320 62.5
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.9e-104 383.3 318 61.9
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.0e-102 377.5 311 62.7
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 3.9e-102 375.6 326 57.1
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 6.3e-100 368.2 320 60.6
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.8e-99 366.7 315 57.1
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-99 365.9 257 74.7
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.9e-97 359.4 251 74.5
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 7.2e-96 354.8 317 55.8
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.0e-94 350.9 293 61.4
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.7e-94 347.8 316 55.1
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 5.3e-91 338.6 320 54.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 2.7e-87 326.2 328 51.2
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-87 325.5 306 59.8
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.5e-82 310.5 213 73.7
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 2.2e-81 306.6 285 56.1
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 6.5e-81 305.1 321 48.6
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.7e-79 299.7 287 56.4
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 9.7e-69 264.6 214 62.1
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 9.1e-59 231.5 297 47.1
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 2.0e-42 177.2 129 67.4
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 7.8e-34 148.7 121 58.7
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.2e-31 139.0 107 66.4
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.1e-30 136.7 112 60.7
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 8.9e-30 135.2 277 35.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.2e-26 124.8 116 54.3
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.8e-26 122.1 107 61.7
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 5.1e-25 119.4 62 87.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 6.2e-23 112.5 365 29.3
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.2e-22 109.4 115 47.8
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.2e-21 108.2 326 28.2
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.2e-19 100.1 71 71.8
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.9e-16 90.9 62 66.1


User provided reference genes

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