Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43906 Brassica carinata HOM05D009405 ORTHO05D011711 1.3e-60 236.1 116 100.0
BcaC09g50939 Brassica carinata HOM05D009405 ORTHO05D011711 2.6e-56 221.9 116 94.8
BcaC02g07936 Brassica carinata HOM05D009405 ORTHO05D011711 4.3e-51 204.5 116 86.2
BcaC07g37532 Brassica carinata HOM05D009405 ORTHO05D011711 7.7e-48 193.7 114 86.0
BraA03t15640Z Brassica rapa HOM05D009405 ORTHO05D011711 5.5e-38 161.0 118 71.2
BcaC05g25372 Brassica carinata HOM05D009405 ORTHO05D011711 1.6e-37 159.5 116 71.6
BcaB07g33476 Brassica carinata HOM05D009405 ORTHO05D011711 1.3e-34 149.8 116 69.8
C08p12840 Brassica napus HOM05D009405 ORTHO05D011711 2.7e-29 132.1 132 56.8
A04p10550 Brassica napus HOM05D009405 ORTHO05D011711 5.2e-28 127.9 134 56.0
A03p65880 Brassica napus HOM05D009405 ORTHO05D011711 5.0e-23 111.3 106 59.4
BcaC07g37156 Brassica carinata HOM05D009405 ORTHO05D011711 1.5e-22 109.8 74 74.3
C05p29580 Brassica napus HOM05D009405 ORTHO05D011711 5.5e-22 107.8 75 74.7
A02p25740 Brassica napus HOM05D009405 ORTHO05D011711 4.7e-21 104.8 128 43.0
C03p67690 Brassica napus HOM05D009405 ORTHO05D011711 3.7e-18 95.1 89 57.3
BolC7t41126H Brassica oleracea HOM05D009405 ORTHO05D011711 1.8e-17 92.8 99 52.5
BolSC21t60228H Brassica oleracea HOM05D009405 ORTHO05D011711 7.0e-17 90.9 107 48.6
A09p41400 Brassica napus HOM05D014165 ORTHO05D016792 4.5e-16 88.2 128 43.0
C05p50120 Brassica napus HOM05D009405 ORTHO05D011711 4.5e-16 88.2 129 42.6
C09p33570 Brassica napus HOM05D009405 ORTHO05D011711 1.5e-14 83.2 75 54.7
A05p35590 Brassica napus HOM05D009405 ORTHO05D011711 1.6e-13 79.7 74 54.1
C09p62570 Brassica napus HOM05D009405 ORTHO05D011711 3.6e-13 78.6 80 52.5
A07p43080 Brassica napus HOM05D009405 ORTHO05D011711 1.0e-12 77.0 111 43.2
BraA02t08976Z Brassica rapa HOM05D010193 ORTHO05D012632 1.0e-12 77.0 126 39.7
C04p37730 Brassica napus HOM05D000305 ORTHO05D000065 1.5e-11 73.2 125 36.8
BraA04t16453Z Brassica rapa HOM05D010193 ORTHO05D012632 2.6e-11 72.4 129 38.0
A04p07620 Brassica napus HOM05D010193 ORTHO05D012632 4.4e-11 71.6 129 37.2
A09p36280 Brassica napus HOM05D010193 ORTHO05D012632 5.7e-11 71.2 129 37.2
C02p13250 Brassica napus HOM05D009405 ORTHO05D011711 5.7e-11 71.2 53 64.2
C07p51450 Brassica napus HOM05D000305 ORTHO05D000065 7.5e-11 70.9 125 36.0
BolC5t31340H Brassica oleracea HOM05D009405 ORTHO05D011711 2.2e-10 69.3 70 47.1
C07p07070 Brassica napus HOM05D009405 ORTHO05D011711 8.3e-10 67.4 109 40.4
BcaC03g17448 Brassica carinata HOM05D010193 ORTHO05D012632 7.0e-09 64.3 109 38.5
BolC4t23236H Brassica oleracea HOM05D010193 ORTHO05D012632 7.0e-09 64.3 126 35.7
BcaB07g31690 Brassica carinata HOM05D000305 ORTHO05D000065 9.1e-09 63.9 126 34.9
A09p23990 Brassica napus HOM05D009405 ORTHO05D011711 9.1e-09 63.9 95 44.2
BcaC06g34455 Brassica carinata HOM05D010193 ORTHO05D012632 2.0e-08 62.8 126 34.1
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 3.5e-08 62.0 108 37.0
BraA09t37462Z Brassica rapa HOM05D009405 ORTHO05D011711 5.9e-08 61.2 87 43.7
BraA03t15375Z Brassica rapa HOM05D010193 ORTHO05D012632 7.7e-08 60.8 122 33.6
BcaB07g31691 Brassica carinata HOM05D010193 ORTHO05D012632 2.9e-07 58.9 66 47.0
BcaB07g31692 Brassica carinata HOM05D010193 ORTHO05D012632 2.9e-07 58.9 66 47.0
BcaC08g45658 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-07 57.8 68 39.7
C06p34140 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-07 57.8 68 39.7
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-07 57.8 66 40.9
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-07 57.4 66 40.9
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-07 57.4 66 40.9
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-07 57.4 66 40.9
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-07 57.4 66 40.9
C09p37980 Brassica napus HOM05D002463 ORTHO05D002669 1.9e-06 56.2 66 45.5
BolC9t56635H Brassica oleracea HOM05D002463 ORTHO05D002669 1.9e-06 56.2 66 45.5
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-06 55.8 63 42.9
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-06 55.1 66 39.4
BcaC09g51392 Brassica carinata HOM05D019666 ORTHO05D039882 4.2e-06 55.1 61 39.3
C01p13630 Brassica napus HOM05D019666 ORTHO05D039882 4.2e-06 55.1 61 39.3
Sp5g18020 Schrenkiella parvula HOM05D000313 ORTHO05D000065 5.5e-06 54.7 71 35.2
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 54.3 68 36.8


User provided reference genes

Program Settings