Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43898 Brassica carinata HOM05D011499 ORTHO05D011963 4.1e-59 231.1 111 100.0
BcaC03g14231 Brassica carinata HOM05D011499 ORTHO05D011963 1.4e-43 179.5 111 80.2
BcaC03g16152 Brassica carinata HOM05D011499 ORTHO05D011963 7.1e-43 177.2 111 79.3
BcaB01g02453 Brassica carinata HOM05D011499 ORTHO05D011963 4.8e-39 164.5 111 73.0
BcaB05g23057 Brassica carinata HOM05D011499 ORTHO05D011963 2.6e-37 158.7 111 73.0
BcaB02g07232 Brassica carinata HOM05D011499 ORTHO05D011963 5.8e-37 157.5 111 72.1
BcaC04g22205 Brassica carinata HOM05D011499 ORTHO05D011963 2.9e-36 155.2 111 71.2
BcaB04g17658 Brassica carinata HOM05D011499 ORTHO05D011963 4.3e-32 141.4 114 64.0
BcaC09g49356 Brassica carinata HOM05D011499 ORTHO05D011963 7.4e-32 140.6 111 65.8
BcaC08g45874 Brassica carinata HOM05D011499 ORTHO05D011963 9.9e-29 130.2 123 58.5
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 3.3e-24 115.2 110 52.7
BcaNung00856 Brassica carinata HOM05D011499 ORTHO05D011963 2.2e-15 85.9 118 44.1
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 1.8e-14 82.8 88 46.6
BcaB02g10963 Brassica carinata HOM05D006735 ORTHO05D011963 4.2e-11 71.6 101 38.6
BcaB04g18785 Brassica carinata HOM05D006735 ORTHO05D011963 4.2e-11 71.6 101 37.6
BcaC04g22074 Brassica carinata HOM05D011499 ORTHO05D009558 1.0e-09 67.0 71 53.5
BcaB03g16748 Brassica carinata HOM05D006735 ORTHO05D011963 1.4e-09 66.6 71 46.5
BcaB02g10644 Brassica carinata HOM05D006735 ORTHO05D011963 2.3e-09 65.9 101 35.6
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 5.1e-09 64.7 110 34.5
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 6.7e-09 64.3 104 36.5
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 6.7e-09 64.3 104 36.5
BcaB01g03128 Brassica carinata HOM05D006735 ORTHO05D011963 1.5e-08 63.2 61 47.5
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 2.5e-08 62.4 104 34.6
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 4.3e-08 61.6 74 39.2
AT2G20625 Arabidopsis thaliana HOM05D006735 ORTHO05D011963 7.4e-08 60.8 72 41.7
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 7.4e-08 60.8 108 32.4
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 9.7e-08 60.5 108 32.4
C03p57400 Brassica napus HOM05D006735 ORTHO05D011963 1.3e-07 60.1 76 42.1
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 1.7e-07 59.7 76 40.8
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 1.7e-07 59.7 76 40.8
BcaC07g38983 Brassica carinata HOM05D011499 ORTHO05D011963 2.2e-07 59.3 35 80.0
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 2.8e-07 58.9 100 31.0
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 2.8e-07 58.9 76 39.5
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 2.8e-07 58.9 80 38.8
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 4.8e-07 58.2 54 38.9
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 4.8e-07 58.2 54 38.9
BcaB01g02166 Brassica carinata HOM05D006735 ORTHO05D011963 6.3e-07 57.8 87 33.3
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 6.3e-07 57.8 54 38.9
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 6.3e-07 57.8 105 32.4
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 6.3e-07 57.8 110 32.7
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 6.3e-07 57.8 54 38.9
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 8.2e-07 57.4 105 32.4
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 8.2e-07 57.4 105 32.4
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 8.2e-07 57.4 108 31.5
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-06 57.0 54 37.0
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 1.1e-06 57.0 96 31.2
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 1.4e-06 56.6 76 40.8
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 1.8e-06 56.2 93 32.3
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-06 55.8 100 29.0
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-06 55.8 105 31.4
BcaB02g06784 Brassica carinata HOM05D006735 ORTHO05D011963 4.1e-06 55.1 87 32.2
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 4.1e-06 55.1 98 30.6
BcaC01g01277 Brassica carinata HOM05D006735 ORTHO05D009558 6.9e-06 54.3 109 33.0
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 6.9e-06 54.3 54 38.9
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 6.9e-06 54.3 54 38.9
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 6.9e-06 54.3 54 38.9
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 6.9e-06 54.3 54 38.9
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 6.9e-06 54.3 54 38.9
BcaB05g22997 Brassica carinata HOM05D006735 ORTHO05D011963 9.1e-06 53.9 65 38.5


User provided reference genes

Program Settings