Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43795 Brassica carinata HOM05D000313 ORTHO05D021935 5.4e-122 441.0 227 100.0
BcaC08g43796 Brassica carinata HOM05D000313 ORTHO05D021935 6.5e-59 231.5 118 100.0
BolC2t10414H Brassica oleracea HOM05D004224 ORTHO05D021935 9.4e-58 227.6 131 91.6
C06p11720 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-46 190.7 98 98.0
BolC6t36307H Brassica oleracea HOM05D000313 ORTHO05D021935 1.3e-43 180.6 179 57.5
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-36 156.8 201 48.3
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-35 152.5 201 47.8
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-35 152.5 201 47.8
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-31 140.6 201 45.8
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-30 136.7 190 43.7
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 2.2e-30 136.7 190 43.7
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-29 134.0 182 48.4
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 9.1e-29 131.3 210 41.9
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-28 130.6 210 41.9
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-28 129.8 210 41.4
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 2.7e-28 129.8 210 41.9
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-27 127.9 194 40.2
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-27 126.3 157 44.6
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-26 124.4 194 39.2
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-26 124.4 194 39.2
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 3.2e-26 122.9 161 44.7
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 1.2e-25 120.9 188 41.5
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-25 119.8 175 42.3
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-25 119.4 189 39.2
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-25 118.2 192 41.1
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 8.0e-25 118.2 174 42.5
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 8.0e-25 118.2 192 41.1
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 8.0e-25 118.2 172 42.4
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 1.4e-24 117.5 189 40.7
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 1.4e-24 117.5 185 42.2
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 8.8e-24 114.8 166 41.6
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-23 113.6 193 38.9
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 5.7e-23 112.1 178 41.6
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 7.5e-23 111.7 215 37.2
BolC1t02308H Brassica oleracea HOM05D000313 ORTHO05D000065 7.5e-23 111.7 90 68.9
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 7.5e-23 111.7 152 42.1
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-23 111.3 186 38.7
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-22 110.9 183 38.8
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-22 108.2 189 38.6
BolC6t36306H Brassica oleracea HOM05D000313 ORTHO05D000065 8.3e-22 108.2 111 55.9
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-21 107.1 194 36.6
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-21 106.7 189 38.1
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-21 106.3 205 37.6
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-21 105.5 155 37.4
BcaB04g17642 Brassica carinata HOM05D000313 ORTHO05D000065 5.4e-21 105.5 144 41.0
BolC4t25557H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-20 102.4 152 40.1
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-20 101.7 186 36.0
BolC5t31140H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-19 101.3 207 35.7
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-19 100.9 142 43.7
C08p04870 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-19 99.4 192 35.4
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-19 98.2 169 40.8
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-19 98.2 169 40.8
C03p73900 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-18 97.1 183 35.0
C02p46330 Brassica napus HOM05D000313 ORTHO05D021935 4.7e-17 92.4 82 62.2
A09p51680 Brassica napus HOM05D000313 ORTHO05D013032 1.8e-16 90.5 147 38.1
C04p39840 Brassica napus HOM05D000313 ORTHO05D013032 3.0e-16 89.7 145 38.6
C05p00190 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-16 89.7 191 33.0
C07p05170 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-16 89.7 191 33.0
BolC6t37003H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-16 89.7 191 33.0
BolC8t46967H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-16 89.7 150 37.3
BraA08t32532Z Brassica rapa HOM05D004768 ORTHO05D005812 1.2e-15 87.8 179 34.6
C08p09500 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-15 86.7 200 35.5
A08p05150 Brassica napus HOM05D004768 ORTHO05D005812 4.4e-15 85.9 176 35.2
BcaB06g28312 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-15 85.5 136 37.5
BcaC08g46159 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-15 84.7 137 38.0
BolC3t15057H Brassica oleracea HOM05D000313 ORTHO05D000065 9.8e-15 84.7 152 37.5
C09p19680 Brassica napus HOM05D000313 ORTHO05D013032 2.2e-14 83.6 52 67.3
BcaC09g50729 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-14 82.0 55 74.5
C05p32580 Brassica napus HOM05D000313 ORTHO05D041766 8.3e-14 81.6 126 40.5
BolC5t31991H Brassica oleracea HOM05D000313 ORTHO05D041766 8.3e-14 81.6 126 40.5
BcaC04g21511 Brassica carinata HOM05D000313 ORTHO05D016800 2.4e-13 80.1 171 33.9
C04p18760 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-13 79.3 56 66.1
C04p23610 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-13 78.6 200 33.5
THA.LOC104813725 Tarenaya hassleriana HOM05D000313 ORTHO05D000065 9.2e-13 78.2 191 29.8
BolC7t43481H Brassica oleracea HOM05D000305 ORTHO05D000065 2.7e-12 76.6 80 50.0
BcaC01g05457 Brassica carinata HOM05D000305 ORTHO05D000065 4.6e-12 75.9 136 38.2
BcaC02g08524 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-12 75.5 194 30.9
C09p30920 Brassica napus HOM05D000313 ORTHO05D016800 5.9e-12 75.5 200 33.0
BolC4t23415H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-12 75.5 95 48.4
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-11 74.3 81 50.6
BcaB06g27784 Brassica carinata HOM05D000305 ORTHO05D000065 1.7e-11 73.9 156 28.8
BcaC05g26370 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-11 73.9 90 50.0
BcaC06g35232 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-11 73.9 201 29.4
C04p23320 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-11 73.9 182 29.7
C07p18420 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 73.2 207 30.4
C09p43600 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 73.2 207 31.4
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 3.0e-11 73.2 98 44.9
C06p26830 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-11 72.4 191 30.9
BcaC04g19486 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-10 71.2 192 29.2
C09p55230 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 71.2 192 29.2
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-10 71.2 193 29.0
A04p08140 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-10 70.5 66 57.6
BcaC01g02208 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-10 69.7 45 75.6
BraA05t19470Z Brassica rapa HOM05D000313 ORTHO05D000065 5.6e-10 68.9 83 47.0
BcaB06g25574 Brassica carinata HOM05D000313 ORTHO05D000065 7.3e-10 68.6 51 66.7
BcaC02g09189 Brassica carinata HOM05D000313 ORTHO05D013032 7.3e-10 68.6 48 60.4
BcaC01g02207 Brassica carinata HOM05D000313 ORTHO05D009979 9.5e-10 68.2 83 45.8
A05p26210 Brassica napus HOM05D000313 ORTHO05D013032 9.5e-10 68.2 48 58.3
BcaC08g45658 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.8 86 46.5
A06p21660 Brassica napus HOM05D000305 ORTHO05D000065 1.6e-09 67.4 58 51.7
C04p18580 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 67.4 143 33.6
BcaC01g05432 Brassica carinata HOM05D013219 ORTHO05D000065 2.1e-09 67.0 176 31.8
BcaB01g01607 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-09 66.6 55 63.6
BcaNung07285 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-09 66.6 55 63.6
BolC5t30813H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-09 66.6 70 52.9
BcaC03g14374 Brassica carinata HOM05D000305 ORTHO05D000065 3.6e-09 66.2 163 27.6
BolC6t37857H Brassica oleracea HOM05D000313 ORTHO05D013032 3.6e-09 66.2 48 58.3
AL614U10020 Arabidopsis lyrata HOM05D000313 ORTHO05D000065 6.2e-09 65.5 72 50.0
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 6.2e-09 65.5 49 59.2
BcaB05g24563 Brassica carinata HOM05D000313 ORTHO05D013032 8.0e-09 65.1 128 32.8
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-09 65.1 154 30.5
BcaC04g20435 Brassica carinata HOM05D000305 ORTHO05D000065 1.0e-08 64.7 175 28.0
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-08 64.7 154 31.8
A09p30430 Brassica napus HOM05D000313 ORTHO05D013032 1.0e-08 64.7 83 43.4
A09p69300 Brassica napus HOM05D000305 ORTHO05D000065 1.0e-08 64.7 175 28.0
C08p54120 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 64.7 175 28.0
BolC8t52920H Brassica oleracea HOM05D000305 ORTHO05D000065 1.0e-08 64.7 175 28.0
BolC8t47526H Brassica oleracea HOM05D000280 ORTHO05D003998 1.8e-08 63.9 74 43.2
BcaC05g26730 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-08 63.5 42 76.2
C03p26720 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 63.5 49 65.3
C02p26880 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-08 63.2 179 28.5
BraA06t24994Z Brassica rapa HOM05D035275 ORTHO05D021583 3.1e-08 63.2 90 36.7
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-08 62.8 154 29.9
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-08 62.8 195 26.2
BolC3t19608H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-08 62.8 174 31.0
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-08 62.8 154 29.9
C07p49510 Brassica napus HOM05D000313 ORTHO05D013032 8.9e-08 61.6 45 55.6
BcaC01g01677 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 61.2 113 37.2
BcaC04g19485 Brassica carinata HOM05D000305 ORTHO05D000065 1.2e-07 61.2 40 72.5
BcaB08g35018 Brassica carinata HOM05D000305 ORTHO05D000065 1.5e-07 60.8 186 23.7
BcaB06g27133 Brassica carinata HOM05D034447 ORTHO05D021583 2.0e-07 60.5 53 47.2
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 2.0e-07 60.5 76 43.4
BcaB06g27533 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-07 60.1 154 24.0
BolC4t24845H Brassica oleracea HOM05D000305 ORTHO05D000065 2.6e-07 60.1 163 27.0
C06p08340 Brassica napus HOM05D000313 ORTHO05D016800 3.4e-07 59.7 53 52.8
C06p14800 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-07 59.7 201 26.9
BolC6t36658H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-07 59.7 201 26.9
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-07 59.3 156 26.3
A01p19100 Brassica napus HOM05D000313 ORTHO05D041797 4.4e-07 59.3 38 60.5
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 59.3 177 28.2
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 4.4e-07 59.3 155 33.5
BolC7t43229H Brassica oleracea HOM05D015840 ORTHO05D018735 4.4e-07 59.3 75 42.7
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-07 59.3 156 26.3
BraA02t05129Z Brassica rapa HOM05D000305 ORTHO05D000065 4.4e-07 59.3 176 26.7
BraA05t20759Z Brassica rapa HOM05D000305 ORTHO05D000065 4.4e-07 59.3 176 26.7
C03p88670 Brassica napus HOM05D000313 ORTHO05D021694 5.8e-07 58.9 95 41.1
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 5.8e-07 58.9 157 31.2
A06p19110 Brassica napus HOM05D035275 ORTHO05D021583 7.5e-07 58.5 115 33.9
BcaC02g10925 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-07 58.2 183 31.7
BcaC07g38196 Brassica carinata HOM05D000313 ORTHO05D000065 9.8e-07 58.2 42 64.3
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 58.2 151 27.2
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 9.8e-07 58.2 154 29.2
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.8 156 26.3
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.8 154 26.6
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.8 154 26.6
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.4 154 29.2
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.4 207 26.1
C07p18950 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.4 96 36.5
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-06 57.4 154 29.2
BraA09t36862Z Brassica rapa HOM05D000313 ORTHO05D021694 1.7e-06 57.4 95 40.0
A06p37320 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 57.0 65 46.2
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 57.0 170 25.9
C03p91370 Brassica napus HOM05D013769 ORTHO05D016089 2.2e-06 57.0 71 47.9
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 57.0 170 25.9
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-06 57.0 170 25.9
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 56.2 154 28.6
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 56.2 154 28.6
BcaC01g03291 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-06 55.8 74 41.9
BolC5t34199H Brassica oleracea HOM05D000305 ORTHO05D000065 4.9e-06 55.8 200 26.0
BraA08t32620Z Brassica rapa HOM05D000313 ORTHO05D019896 4.9e-06 55.8 79 39.2
BraA08t33304Z Brassica rapa HOM05D023194 ORTHO05D019896 4.9e-06 55.8 79 39.2
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 6.4e-06 55.5 151 26.5
A04p28790 Brassica napus HOM05D022358 ORTHO05D028328 6.4e-06 55.5 43 53.5
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-06 55.5 151 26.5
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-06 55.5 207 26.6
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-06 55.5 161 28.0
BraA04t18356Z Brassica rapa HOM05D022358 ORTHO05D028328 6.4e-06 55.5 43 53.5
BraA08t33858Z Brassica rapa HOM05D022358 ORTHO05D028328 6.4e-06 55.5 43 53.5
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 6.4e-06 55.5 165 26.1
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 8.3e-06 55.1 48 60.4
C02p35780 Brassica napus HOM05D016228 ORTHO05D022029 8.3e-06 55.1 43 51.2
C07p00620 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-06 55.1 161 27.3
C08p23130 Brassica napus HOM05D000313 ORTHO05D021694 8.3e-06 55.1 37 64.9


User provided reference genes

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