Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 4.0e-144 515.0 312 100.0
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 8.3e-81 304.7 315 70.8
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.5e-77 293.1 470 51.9
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 7.3e-77 291.6 343 64.1
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.0e-74 283.5 474 50.4
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 3.2e-72 276.2 377 56.5
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 2.0e-71 273.5 283 68.6
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 7.3e-69 265.0 286 65.4
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 4.4e-58 229.2 166 79.5
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 1.7e-57 227.3 135 91.9
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.4e-56 222.2 282 51.8
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 7.1e-56 221.9 126 96.0
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 4.0e-51 206.1 123 93.5
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 8.4e-49 198.4 128 87.5
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 1.9e-48 197.2 117 91.5
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 1.6e-47 194.1 123 89.4
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 7.8e-47 191.8 123 88.6
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 1.0e-46 191.4 227 63.9
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 5.1e-46 189.1 123 88.6
BolC6t36234H Brassica oleracea HOM05D004128 ORTHO05D033837 2.4e-43 180.3 139 92.8
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 4.0e-43 179.5 196 71.9
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 6.9e-43 178.7 291 51.9
BraA05t21717Z Brassica rapa HOM05D004128 ORTHO05D033837 4.5e-34 149.4 164 72.6
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 3.5e-23 113.2 133 56.4
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 2.3e-22 110.5 123 62.6
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 9.6e-21 105.1 127 58.3
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 9.6e-21 105.1 123 61.8
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-20 104.8 123 61.0
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.3e-20 104.8 123 61.0
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.7e-20 103.2 168 49.4
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 1.1e-19 101.7 127 58.3
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 1.8e-19 100.9 127 57.5
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-18 97.8 127 55.1
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 2.6e-18 97.1 89 69.7
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 3.4e-18 96.7 68 76.5
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-18 96.7 68 77.9
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-18 96.7 68 77.9
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 4.5e-18 96.3 121 58.7
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 2.7e-15 87.0 69 72.5
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 4.6e-15 86.3 100 54.0
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 5.1e-14 82.8 86 61.6
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 1.1e-13 81.6 86 64.0
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 2.8e-12 77.0 101 57.4
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 6.3e-12 75.9 72 68.1
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.8e-11 74.3 118 49.2
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 5.3e-11 72.8 70 64.3
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 5.3e-11 72.8 70 64.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 5.3e-11 72.8 68 64.7
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 5.3e-11 72.8 70 64.3
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 5.3e-11 72.8 70 64.3
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 9.0e-11 72.0 70 64.3
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 1.2e-10 71.6 70 67.1
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 1.2e-10 71.6 89 58.4
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-10 71.2 70 62.9
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-10 71.2 70 62.9
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 1.5e-10 71.2 72 61.1
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 1.5e-10 71.2 72 61.1
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 3.4e-10 70.1 68 66.2
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 4.5e-10 69.7 68 63.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-10 69.7 72 61.1
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 5.9e-10 69.3 101 51.5
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 7.6e-10 68.9 68 67.6
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 7.6e-10 68.9 68 66.2
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 7.6e-10 68.9 68 67.6
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 1.0e-09 68.6 68 66.2
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.0e-09 68.6 163 55.2
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 1.0e-09 68.6 68 66.2
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 1.3e-09 68.2 68 66.2
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-09 68.2 69 62.3
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-09 68.2 68 61.8
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 1.3e-09 68.2 68 66.2
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-09 65.5 72 59.7
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 7.2e-08 62.4 68 61.8
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.2e-07 61.6 113 45.1
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 4.6e-07 59.7 113 44.2
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 7.9e-07 58.9 58 65.5
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 1.3e-06 58.2 72 58.3


User provided reference genes

Program Settings