Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43722 Brassica carinata HOM05D051491 ORTHO05D039086 4.3e-43 177.6 87 100.0
BolC6t36223H Brassica oleracea HOM05D051491 ORTHO05D039086 4.3e-43 177.6 87 100.0
BcaC06g36500 Brassica carinata HOM05D002128 ORTHO05D012943 1.9e-11 72.4 45 75.6
A07p01730 Brassica napus HOM05D002128 ORTHO05D002497 1.9e-11 72.4 45 75.6
C07p03590 Brassica napus HOM05D002128 ORTHO05D002497 1.9e-11 72.4 45 75.6
BolC7t40755H Brassica oleracea HOM05D002128 ORTHO05D002497 1.9e-11 72.4 45 75.6
BraA07t27974Z Brassica rapa HOM05D002128 ORTHO05D002497 1.9e-11 72.4 45 75.6
BcaB03g16686 Brassica carinata HOM05D002128 ORTHO05D002497 7.3e-11 70.5 45 71.1
A07p01740 Brassica napus HOM05D002128 ORTHO05D002497 1.3e-10 69.7 45 73.3
Thhalv10022601m.g Eutrema salsugineum HOM05D002128 ORTHO05D002497 3.6e-10 68.2 45 66.7
AL3G53000 Arabidopsis lyrata HOM05D002128 ORTHO05D002497 1.8e-09 65.9 45 64.4
AT2G18915 Arabidopsis thaliana HOM05D002128 ORTHO05D002497 1.8e-09 65.9 45 64.4
BcaC06g36490 Brassica carinata HOM05D002128 ORTHO05D002497 3.1e-09 65.1 45 64.4
C07p03660 Brassica napus HOM05D002128 ORTHO05D002497 3.1e-09 65.1 45 64.4
BolC7t40763H Brassica oleracea HOM05D002128 ORTHO05D002497 3.1e-09 65.1 45 64.4
Sp3g32390 Schrenkiella parvula HOM05D002128 ORTHO05D002497 9.0e-09 63.5 45 62.2
Carub.0003s3316 Capsella rubella HOM05D002128 ORTHO05D002497 4.4e-08 61.2 46 63.0
BcaB03g16685 Brassica carinata HOM05D002128 ORTHO05D002497 5.8e-08 60.8 45 60.0
AL1G38160 Arabidopsis lyrata HOM05D002128 ORTHO05D012943 9.9e-08 60.1 45 60.0
AL3G51790 Arabidopsis lyrata HOM05D002128 ORTHO05D012943 9.9e-08 60.1 45 60.0
AL3G43720 Arabidopsis lyrata HOM05D002128 ORTHO05D012943 8.4e-07 57.0 45 57.8


User provided reference genes

Program Settings