Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43682 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-30 134.4 67 100.0
BcaC08g44225 Brassica carinata HOM05D000589 ORTHO05D000401 2.1e-21 105.1 67 79.1
BcaB02g11137 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-16 88.6 60 75.0
BolC7t43042H Brassica oleracea HOM05D000214 ORTHO05D000131 4.6e-13 77.4 56 73.2
BcaC01g05206 Brassica carinata HOM05D000589 ORTHO05D024123 1.5e-11 72.4 60 58.3
BcaC08g43342 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-10 69.3 60 60.0
BcaC07g39061 Brassica carinata HOM05D000589 ORTHO05D000401 3.7e-10 67.8 58 58.6
BcaB07g32928 Brassica carinata HOM05D000589 ORTHO05D000401 4.8e-10 67.4 60 58.3
BcaC05g28172 Brassica carinata HOM05D000589 ORTHO05D000401 4.8e-10 67.4 56 60.7
Thhalv10009540m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 8.2e-10 66.6 58 53.4
BcaC06g34185 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-09 66.2 60 58.3
BcaC06g34186 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-09 66.2 60 58.3
BcaC08g45423 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-09 66.2 60 55.0
BcaC09g49614 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-09 66.2 61 57.4
BcaC09g50369 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-09 66.2 58 55.2
BolC2t11689H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-09 65.9 58 58.6
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 1.4e-09 65.9 58 60.3
BcaC06g35414 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-09 65.5 60 55.0
BcaC03g18099 Brassica carinata HOM05D000589 ORTHO05D000401 2.4e-09 65.1 51 64.7
BcaC01g03565 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-09 64.7 60 55.0
BcaC05g25422 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-09 64.7 60 53.3
BcaC06g34180 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-09 64.7 60 58.3
BcaC06g34369 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-09 64.7 52 61.5
BcaC06g34740 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-09 64.7 60 56.7
C03p63700 Brassica napus HOM05D000589 ORTHO05D000401 3.1e-09 64.7 59 61.0
BolC3t18578H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-09 64.7 48 70.8
BolC3t18627H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-09 64.7 59 61.0
BcaC03g15625 Brassica carinata HOM05D029759 ORTHO05D024123 4.0e-09 64.3 60 53.3
BcaC06g36245 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-09 64.3 52 63.5
BolC7t41019H Brassica oleracea HOM05D000589 ORTHO05D000401 4.0e-09 64.3 59 61.0
BcaB02g10910 Brassica carinata HOM05D000589 ORTHO05D000401 5.3e-09 63.9 60 53.3
BcaB05g23713 Brassica carinata HOM05D000589 ORTHO05D000401 5.3e-09 63.9 59 54.2
BcaB06g26070 Brassica carinata HOM05D000589 ORTHO05D000401 5.3e-09 63.9 58 60.3
BcaC08g45835 Brassica carinata HOM05D000589 ORTHO05D000401 5.3e-09 63.9 60 53.3
BcaB04g18258 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-09 63.2 59 59.3
BcaC01g02623 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-09 63.2 66 53.0
BcaC05g26160 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-09 63.2 52 61.5
BcaC06g35286 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-09 63.2 66 53.0
BcaC07g38726 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-09 63.2 52 61.5
BcaB05g22172 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-08 62.8 58 56.9
BcaC03g16590 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-08 62.8 60 53.3
BcaC03g17280 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-08 62.8 52 59.6
BcaC04g20516 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-08 62.8 58 53.4
BcaC04g22354 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-08 62.8 56 57.1
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-08 62.8 65 53.8
BcaC04g22127 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-08 62.4 58 53.4
BcaC07g38991 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-08 62.4 60 56.7
BcaC07g41767 Brassica carinata HOM05D000589 ORTHO05D027494 1.5e-08 62.4 58 53.4
BcaB05g22283 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-08 62.0 60 55.0
BcaC05g26280 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-08 62.0 56 57.1
BcaC06g34077 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-08 61.6 51 58.8
BcaC09g48715 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-08 61.6 58 56.9
BolC2t11203H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-08 61.6 57 50.9
BcaC01g03024 Brassica carinata HOM05D000589 ORTHO05D019893 3.4e-08 61.2 56 55.4
BcaC01g06309 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-08 61.2 59 54.2
BcaC03g16970 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-08 61.2 58 56.9
BcaC07g38276 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-08 61.2 56 57.1
BcaC01g04973 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-08 60.8 65 52.3
BcaC03g16880 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-08 60.8 58 58.6
BcaC04g20929 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-08 60.8 57 50.9
BcaC05g27484 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-08 60.8 56 55.4
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.5e-08 60.8 56 55.4
BcaC01g05116 Brassica carinata HOM05D000589 ORTHO05D019893 5.8e-08 60.5 54 55.6
BcaC03g15769 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-08 60.5 59 50.8
BcaC04g21117 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-08 60.5 58 55.2
BcaC05g29493 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-08 60.5 56 57.1
BcaC09g48878 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-08 60.5 60 53.3
BcaB05g24938 Brassica carinata HOM05D000589 ORTHO05D000401 7.6e-08 60.1 58 53.4
BcaC02g12006 Brassica carinata HOM05D000589 ORTHO05D000401 7.6e-08 60.1 60 50.0
BcaC09g48857 Brassica carinata HOM05D000589 ORTHO05D000401 7.6e-08 60.1 58 53.4
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 7.6e-08 60.1 65 49.2
BolC7t42127H Brassica oleracea HOM05D000589 ORTHO05D000401 7.6e-08 60.1 52 53.8
BcaC02g07720 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-07 59.7 51 58.8
BcaC07g38291 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-07 59.7 57 50.9
BcaNung05024 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-07 59.7 52 55.8
BolC8t48721H Brassica oleracea HOM05D000589 ORTHO05D000401 1.0e-07 59.7 57 50.9
BcaB01g00196 Brassica carinata HOM05D000589 ORTHO05D019893 1.3e-07 59.3 58 51.7
BcaC04g23412 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-07 59.3 60 56.7
BcaC06g34721 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-07 59.3 60 56.7
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-07 59.3 56 51.8
BolC4t26270H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-07 59.3 57 52.6
BcaB01g01645 Brassica carinata HOM05D000589 ORTHO05D000401 1.7e-07 58.9 58 51.7
C02p50410 Brassica napus HOM05D000589 ORTHO05D000401 1.7e-07 58.9 58 53.4
BolC7t43162H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-07 58.9 58 51.7
BcaB04g17336 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-07 58.5 52 57.7
BcaC05g24604 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-07 58.5 58 50.0
BolC9t53773H Brassica oleracea HOM05D000589 ORTHO05D000401 2.2e-07 58.5 60 56.7
Thhalv10000723m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 2.2e-07 58.5 59 45.8
Thhalv10017987m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 2.2e-07 58.5 50 54.0
BcaC03g17918 Brassica carinata HOM05D000589 ORTHO05D000401 2.9e-07 58.2 65 50.8
BcaC06g34386 Brassica carinata HOM05D000589 ORTHO05D000401 2.9e-07 58.2 57 49.1
CARHR256470 Cardamine hirsuta HOM05D000589 ORTHO05D000401 2.9e-07 58.2 61 50.8
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 3.8e-07 57.8 60 51.7
BcaC01g03681 Brassica carinata HOM05D000589 ORTHO05D000401 3.8e-07 57.8 62 46.8
BcaC03g15869 Brassica carinata HOM05D000589 ORTHO05D000401 3.8e-07 57.8 60 46.7
BcaC09g51077 Brassica carinata HOM05D000589 ORTHO05D000401 3.8e-07 57.8 57 49.1
BolC6t37665H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-07 57.8 51 56.9
BcaC02g09851 Brassica carinata HOM05D000589 ORTHO05D000401 4.9e-07 57.4 59 47.5
BcaC03g12965 Brassica carinata HOM05D000589 ORTHO05D000401 4.9e-07 57.4 56 50.0
BcaC03g16704 Brassica carinata HOM05D000589 ORTHO05D000401 4.9e-07 57.4 59 44.1
BcaB08g35107 Brassica carinata HOM05D000589 ORTHO05D000401 6.5e-07 57.0 59 49.2
BcaC09g51529 Brassica carinata HOM05D000589 ORTHO05D000401 6.5e-07 57.0 58 50.0
BolC8t51030H Brassica oleracea HOM05D000589 ORTHO05D000401 6.5e-07 57.0 49 59.2
BcaC04g20168 Brassica carinata HOM05D000589 ORTHO05D000401 8.4e-07 56.6 52 55.8
BcaC05g25199 Brassica carinata HOM05D000589 ORTHO05D000401 8.4e-07 56.6 58 48.3
Thhalv10027591m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 8.4e-07 56.6 52 48.1
BcaB03g15492 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-06 56.2 57 49.1
BcaB04g20547 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-06 56.2 57 49.1
BcaC06g33355 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-06 56.2 65 44.6
BolC4t27556H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-06 56.2 57 50.9
BcaB01g00894 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-06 55.8 59 50.8
BcaB08g34627 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-06 55.8 57 47.4
BcaC01g00954 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-06 55.8 56 50.0
BcaC04g19838 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-06 55.8 57 49.1
BcaNung04344 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-06 55.8 50 52.0
BolC8t47046H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-06 55.8 60 50.0
BcaC02g10499 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 56 50.0
BcaC03g15666 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 57 45.6
BcaC03g16996 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 56 50.0
BcaC04g18689 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 58 46.6
BcaC04g23176 Brassica carinata HOM05D000589 ORTHO05D015460 1.9e-06 55.5 57 45.6
BcaC07g39610 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 60 46.7
BcaC07g40742 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 59 45.8
BcaNung02550 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-06 55.5 57 47.4
BolC6t38117H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-06 55.5 46 58.7
BolC2t11945H Brassica oleracea HOM05D000589 ORTHO05D000401 2.5e-06 55.1 60 46.7
BolC5t30339H Brassica oleracea HOM05D000589 ORTHO05D000401 2.5e-06 55.1 51 54.9
BcaB02g10350 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 50 56.0
BcaB03g13921 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 56 48.2
BcaB04g19149 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 54 53.7
BcaB06g28309 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 56 50.0
BcaC06g35381 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 56 48.2
BcaC06g35382 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 56 48.2
BcaC08g43086 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-06 54.7 53 49.1
BcaC09g48667 Brassica carinata HOM05D009120 ORTHO05D024093 3.2e-06 54.7 59 49.2
BcaC09g51052 Brassica carinata HOM05D000589 ORTHO05D027494 3.2e-06 54.7 56 50.0
C01p47140 Brassica napus HOM05D009120 ORTHO05D024093 3.2e-06 54.7 59 49.2
BcaB07g31934 Brassica carinata HOM05D000589 ORTHO05D000401 4.2e-06 54.3 51 52.9
BcaC03g17917 Brassica carinata HOM05D000589 ORTHO05D000401 4.2e-06 54.3 53 52.8
BcaC08g44892 Brassica carinata HOM05D000589 ORTHO05D000401 4.2e-06 54.3 51 52.9
BcaC09g50350 Brassica carinata HOM05D000589 ORTHO05D000401 4.2e-06 54.3 58 44.8
C09p61020 Brassica napus HOM05D000589 ORTHO05D000401 4.2e-06 54.3 50 50.0
BcaB02g09876 Brassica carinata HOM05D000589 ORTHO05D000401 5.5e-06 53.9 55 49.1
BcaB05g22908 Brassica carinata HOM05D000589 ORTHO05D015460 5.5e-06 53.9 57 45.6
BcaB08g36305 Brassica carinata HOM05D000589 ORTHO05D000401 5.5e-06 53.9 57 45.6
BcaC03g17303 Brassica carinata HOM05D000589 ORTHO05D000401 5.5e-06 53.9 58 46.6
BcaC05g26168 Brassica carinata HOM05D000589 ORTHO05D000401 5.5e-06 53.9 58 48.3
BolC6t35633H Brassica oleracea HOM05D000589 ORTHO05D000401 5.5e-06 53.9 52 50.0
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 5.5e-06 53.9 57 49.1
BcaC03g16881 Brassica carinata HOM05D000589 ORTHO05D000401 7.1e-06 53.5 56 50.0
BcaC03g18152 Brassica carinata HOM05D000589 ORTHO05D000401 9.3e-06 53.1 56 42.9
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 9.3e-06 53.1 55 45.5
BolC7t42235H Brassica oleracea HOM05D000214 ORTHO05D000131 9.3e-06 53.1 50 52.0
BolC7t42884H Brassica oleracea HOM05D000589 ORTHO05D000401 9.3e-06 53.1 57 45.6


User provided reference genes

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