Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43653 Brassica carinata HOM05D015596 ORTHO05D000101 1.3e-54 216.1 107 100.0
C06p10710 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-29 132.5 68 94.1
BolC6t36157H Brassica oleracea HOM05D000171 ORTHO05D000101 1.9e-29 132.5 68 94.1
BcaC08g43649 Brassica carinata HOM05D000171 ORTHO05D000101 8.1e-28 127.1 61 100.0
C06p10670 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-28 127.1 61 100.0
BolC6t36149H Brassica oleracea HOM05D000171 ORTHO05D000101 8.1e-28 127.1 61 100.0
BraA08t32678Z Brassica rapa HOM05D000171 ORTHO05D000101 4.0e-27 124.8 61 98.4
BraA06t23214Z Brassica rapa HOM05D000171 ORTHO05D000101 2.0e-26 122.5 61 96.7
AL4G31270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.6e-21 104.4 61 83.6
Thhalv10008003m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-19 99.4 62 77.4
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-18 94.0 61 75.4
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-18 94.0 61 75.4
Carub.0005s0876 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-17 93.2 61 73.8
A02p18970 Brassica napus HOM05D000171 ORTHO05D000101 7.1e-16 87.4 61 65.6
A02p18980 Brassica napus HOM05D000171 ORTHO05D000101 7.1e-16 87.4 61 65.6
C02p31520 Brassica napus HOM05D000171 ORTHO05D000101 7.1e-16 87.4 61 65.6
BraA02t06939Z Brassica rapa HOM05D000171 ORTHO05D000101 7.1e-16 87.4 61 65.6
BcaC03g15472 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-15 85.9 61 63.9
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.7e-15 85.5 61 65.6
Sp1g05850 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.9e-14 81.6 61 63.9
C03p93170 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-12 76.3 61 59.0
AT1G55947 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.8e-12 75.5 79 53.2
BcaC01g01564 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-12 75.1 61 60.7
A08p00330 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-12 75.1 61 59.0
BolC3t21616H Brassica oleracea HOM05D000171 ORTHO05D000101 3.7e-12 75.1 61 60.7
BraA02t06948Z Brassica rapa HOM05D000171 ORTHO05D000101 8.2e-12 73.9 54 61.1
BcaB06g26495 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-11 73.2 63 57.1
BolC2t09183H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-11 73.2 53 62.3
BraA08t32091Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-11 73.2 61 57.4
A02p19000 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-11 72.0 54 59.3
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.3e-11 71.2 62 50.0
Carub.0001s4456 Capsella rubella HOM05D000171 ORTHO05D000101 6.9e-11 70.9 45 68.9
BcaB04g16928 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-09 66.2 59 55.9
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.8e-09 65.1 75 48.0
AL3G47620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.5e-09 64.3 62 50.0
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-08 63.2 62 51.6
BcaC08g43652 Brassica carinata HOM05D015596 ORTHO05D020057 3.2e-08 62.0 50 68.0
Carub.0003s3063 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-08 62.0 61 52.5
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 59.7 75 46.7
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 3.5e-07 58.5 61 47.5
Carub.0003s3064 Capsella rubella HOM05D000171 ORTHO05D000101 3.5e-07 58.5 61 45.9
Carub.0004s2322 Capsella rubella HOM05D000171 ORTHO05D000101 3.5e-07 58.5 63 47.6
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 4.6e-07 58.2 61 45.9
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 4.6e-07 58.2 61 45.9
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 4.6e-07 58.2 61 45.9
BcaB03g13267 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-06 57.0 75 44.0
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-06 57.0 61 45.9
C06p10700 Brassica napus HOM05D015596 ORTHO05D020057 1.0e-06 57.0 28 100.0
BolC8t49012H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-06 57.0 61 49.2
AL3G49550 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 56.6 60 50.0
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-06 56.2 53 45.3
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.3e-06 55.8 63 47.6
CARHR226700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-06 55.5 61 47.5
AL4G38860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-06 54.7 41 58.5
AL4G38850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.7e-06 54.3 62 46.8
C02p62250 Brassica napus HOM05D004904 ORTHO05D000101 8.7e-06 53.9 91 37.4


User provided reference genes

Program Settings