Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43306 Brassica carinata HOM05D037946 ORTHO05D031752 1.2e-38 162.9 93 100.0
C06p06530 Brassica napus HOM05D037946 ORTHO05D031752 1.2e-38 162.9 93 100.0
BolC6t35765H Brassica oleracea HOM05D037946 ORTHO05D031752 1.2e-38 162.9 93 100.0
BolC7t46385H Brassica oleracea HOM05D001398 ORTHO05D001467 1.8e-15 85.9 66 80.3
C07p59410 Brassica napus HOM05D001398 ORTHO05D001467 6.8e-15 84.0 66 78.8
A03p61680 Brassica napus HOM05D001398 ORTHO05D001467 6.4e-13 77.4 64 76.6
BraA03t15207Z Brassica rapa HOM05D001398 ORTHO05D001467 6.4e-13 77.4 64 76.6
BcaNung02145 Brassica carinata HOM05D001398 ORTHO05D001467 3.2e-12 75.1 66 63.6
BcaC09g52092 Brassica carinata HOM05D001398 ORTHO05D001467 1.4e-07 59.7 71 64.8
C01p05780 Brassica napus HOM05D001398 ORTHO05D001467 1.4e-07 59.7 71 64.8
Thhalv10024217m.g Eutrema salsugineum HOM05D001398 ORTHO05D001467 1.4e-07 59.7 87 54.0
A01p05360 Brassica napus HOM05D001398 ORTHO05D001467 5.3e-07 57.8 82 57.3
BraA01t00510Z Brassica rapa HOM05D001398 ORTHO05D001467 5.3e-07 57.8 82 57.3
Carub.0007s0756 Capsella rubella HOM05D001398 ORTHO05D001467 5.3e-07 57.8 68 60.3
Aa31sc131G30 Aethionema arabicum HOM05D001398 ORTHO05D001467 4.4e-06 54.7 71 50.7
AL7G18770 Arabidopsis lyrata HOM05D001398 ORTHO05D001467 7.6e-06 53.9 64 53.1


User provided reference genes

Program Settings