Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43293 Brassica carinata HOM05D000320 ORTHO05D090661 5.5e-65 250.8 120 100.0
BcaB02g10528 Brassica carinata HOM05D000320 ORTHO05D000532 6.5e-34 147.5 107 70.1
A05p12480 Brassica napus HOM05D000320 ORTHO05D000532 3.9e-31 138.3 116 64.7
BolC4t23184H Brassica oleracea HOM05D000320 ORTHO05D000532 3.9e-31 138.3 107 66.4
BraA05t20186Z Brassica rapa HOM05D000320 ORTHO05D000532 3.9e-31 138.3 116 64.7
BcaC02g11390 Brassica carinata HOM05D000320 ORTHO05D000532 5.2e-31 137.9 107 66.4
C04p16100 Brassica napus HOM05D000320 ORTHO05D000532 4.4e-30 134.8 107 65.4
Sp1g03540 Schrenkiella parvula HOM05D000320 ORTHO05D000532 1.2e-19 100.1 134 44.0
Thhalv10006649m.g Eutrema salsugineum HOM05D000320 ORTHO05D000532 1.6e-19 99.8 135 45.2
AT1G04700 Arabidopsis thaliana HOM05D000320 ORTHO05D000532 8.5e-18 94.0 137 46.0
AL1G14410 Arabidopsis lyrata HOM05D000320 ORTHO05D000532 1.1e-17 93.6 136 45.6
CARHR004080 Cardamine hirsuta HOM05D000320 ORTHO05D000532 7.2e-17 90.9 139 42.4
Aa31LG1G20180 Aethionema arabicum HOM05D000320 ORTHO05D000532 5.2e-15 84.7 178 33.1
THA.LOC104801048 Tarenaya hassleriana HOM05D000320 ORTHO05D000532 1.2e-14 83.6 175 34.3
A10p03130 Brassica napus HOM05D000320 ORTHO05D000532 9.8e-14 80.5 134 42.5
THA.LOC104816019 Tarenaya hassleriana HOM05D000320 ORTHO05D000532 1.7e-13 79.7 176 33.5
C05p02900 Brassica napus HOM05D000320 ORTHO05D000532 2.8e-13 79.0 134 41.8
BolC5t29071H Brassica oleracea HOM05D000320 ORTHO05D000532 6.3e-13 77.8 134 41.0
BraA10t42586Z Brassica rapa HOM05D000320 ORTHO05D000532 1.5e-09 66.6 133 38.3


User provided reference genes

Program Settings