Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43286 Brassica carinata HOM05D004137 ORTHO05D004804 4.0e-29 130.6 59 100.0
BraA01t01711Z Brassica rapa HOM05D004137 ORTHO05D004804 2.5e-15 84.7 51 78.4
Thhalv10027319m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 5.7e-15 83.6 49 73.5
A01p17580 Brassica napus HOM05D004137 ORTHO05D004804 1.3e-14 82.4 54 72.2
Sp7g24280 Schrenkiella parvula HOM05D004137 ORTHO05D004804 3.7e-14 80.9 81 51.9
BcaNung02428 Brassica carinata HOM05D004137 ORTHO05D004804 4.8e-14 80.5 41 85.4
BcaC09g50691 Brassica carinata HOM05D004137 ORTHO05D004804 2.4e-13 78.2 41 82.9
C01p22180 Brassica napus HOM05D004137 ORTHO05D004804 2.4e-13 78.2 41 82.9
BolC1t02148H Brassica oleracea HOM05D004137 ORTHO05D004804 5.3e-13 77.0 41 80.5
Carub.0007s1461 Capsella rubella HOM05D004137 ORTHO05D004804 2.6e-12 74.7 81 46.9
AL7G26620 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 1.7e-11 72.0 81 49.4
CARHR233900 Cardamine hirsuta HOM05D004137 ORTHO05D004804 5.0e-11 70.5 82 47.6
A03p56610 Brassica napus HOM05D004137 ORTHO05D004804 8.5e-11 69.7 45 68.9
BcaC06g32758 Brassica carinata HOM05D004137 ORTHO05D004804 3.2e-10 67.8 44 65.9
BraA03t14731Z Brassica rapa HOM05D004137 ORTHO05D004804 2.1e-09 65.1 44 65.9
C07p54810 Brassica napus HOM05D004137 ORTHO05D004804 2.7e-09 64.7 51 60.8
BolC7t45970H Brassica oleracea HOM05D004137 ORTHO05D004804 2.7e-09 64.7 51 60.8


User provided reference genes

Program Settings