Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 2.9e-191 671.8 345 100.0
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 3.0e-132 475.7 318 82.1
C07p09020 Brassica napus HOM05D013416 ORTHO05D024230 5.3e-113 411.8 236 91.5
BolC7t41313H Brassica oleracea HOM05D013416 ORTHO05D024230 5.3e-113 411.8 236 91.5
A05p34580 Brassica napus HOM05D013416 ORTHO05D024230 3.3e-99 365.9 203 92.1
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 2.5e-94 349.7 234 81.6
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 1.4e-89 334.0 207 86.0
C08p34070 Brassica napus HOM05D003004 ORTHO05D003860 1.5e-78 297.4 159 95.6
BcaC06g34303 Brassica carinata HOM05D013416 ORTHO05D094383 1.0e-39 168.3 159 64.8
BolC4t22383H Brassica oleracea HOM05D013416 ORTHO05D028192 7.1e-33 145.6 79 94.9
C07p30550 Brassica napus HOM05D013416 ORTHO05D028192 1.3e-31 141.4 123 70.7
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 3.7e-29 133.3 86 82.6
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 1.4e-28 131.3 211 45.0
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 1.5e-27 127.9 231 41.1
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 2.6e-27 127.1 212 42.5
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 4.5e-27 126.3 264 39.0
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 7.6e-27 125.6 200 43.5
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.3e-26 124.8 231 40.7
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 3.8e-26 123.2 218 42.2
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 3.8e-26 123.2 211 43.1
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 8.4e-26 122.1 211 43.6
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 8.4e-26 122.1 344 36.3
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 1.1e-25 121.7 246 41.1
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.1e-25 121.7 345 35.9
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 9.3e-25 118.6 340 35.3
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.6e-24 117.9 211 43.1
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 1.8e-23 114.4 205 42.0
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 3.0e-23 113.6 343 35.9
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 5.1e-23 112.8 346 34.4
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 8.7e-23 112.1 335 36.1
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 1.9e-22 110.9 222 40.5
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 1.6e-21 107.8 144 50.0
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 2.8e-21 107.1 132 52.3
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 2.8e-21 107.1 131 52.7
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 8.2e-21 105.5 138 50.7
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 8.2e-21 105.5 248 39.5
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 1.4e-20 104.8 322 35.4
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 1.4e-20 104.8 322 35.4
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 2.4e-20 104.0 318 34.0
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 2.4e-20 104.0 208 42.8
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 3.1e-20 103.6 185 41.1
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 4.0e-20 103.2 136 50.0
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 6.9e-20 102.4 206 40.8
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 6.9e-20 102.4 206 40.8
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 1.2e-19 101.7 163 47.9
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 1.5e-19 101.3 132 50.0
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 2.0e-19 100.9 163 47.9
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 2.6e-19 100.5 312 34.9
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 7.6e-19 99.0 349 33.2
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 1.3e-18 98.2 250 36.0
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 1.3e-18 98.2 206 38.8
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 2.2e-18 97.4 330 33.3
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 2.9e-18 97.1 342 33.0
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 3.8e-18 96.7 350 32.6
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 4.9e-18 96.3 327 35.2
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 4.9e-18 96.3 206 38.8
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 4.9e-18 96.3 327 35.2
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 4.9e-18 96.3 137 50.4
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 6.5e-18 95.9 138 47.8
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 8.4e-18 95.5 199 39.2
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 8.4e-18 95.5 159 42.1
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 1.1e-17 95.1 347 33.1
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 3.2e-17 93.6 361 33.0
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 3.2e-17 93.6 164 42.7
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 4.2e-17 93.2 245 37.6
C06p21700 Brassica napus HOM05D008956 ORTHO05D100830 4.2e-17 93.2 122 46.7
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 4.2e-17 93.2 357 32.8
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 5.5e-17 92.8 146 47.3
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 5.5e-17 92.8 115 51.3
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 7.1e-17 92.4 130 46.2
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.6e-16 91.3 248 36.3
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 1.6e-16 91.3 263 35.0
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 2.1e-16 90.9 263 35.4
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 2.1e-16 90.9 127 48.8
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 2.1e-16 90.9 206 37.4
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 2.1e-16 90.9 206 37.4
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 2.1e-16 90.9 320 32.5
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 2.1e-16 90.9 163 42.9
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 3.5e-16 90.1 146 46.6
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 3.5e-16 90.1 146 46.6
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 3.5e-16 90.1 223 36.3
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 4.6e-16 89.7 223 36.3
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 4.6e-16 89.7 163 44.2
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 4.6e-16 89.7 163 44.2
C01p08410 Brassica napus HOM05D010232 ORTHO05D016018 7.9e-16 89.0 145 42.1
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 7.9e-16 89.0 158 44.3
BolC1t00824H Brassica oleracea HOM05D010232 ORTHO05D016018 7.9e-16 89.0 145 42.1
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 1.0e-15 88.6 206 36.9
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.3e-15 88.2 205 38.0
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 1.3e-15 88.2 350 31.7
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 8.7e-15 85.5 322 30.7
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 1.1e-14 85.1 199 38.2
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 1.5e-14 84.7 156 41.7
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 2.5e-14 84.0 198 38.4
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 2.5e-14 84.0 146 43.2
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 3.3e-14 83.6 140 43.6
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 4.3e-14 83.2 158 41.1
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 4.3e-14 83.2 142 43.0
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 7.4e-14 82.4 209 40.2
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 9.7e-14 82.0 146 43.2
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 1.3e-13 81.6 113 49.6
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 2.2e-13 80.9 360 31.7
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 2.8e-13 80.5 142 38.7
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 3.7e-13 80.1 123 46.3
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 3.7e-13 80.1 196 36.7
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 4.8e-13 79.7 127 46.5
BolC9t58524H Brassica oleracea HOM05D010232 ORTHO05D016018 4.8e-13 79.7 137 42.3
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 6.3e-13 79.3 250 34.4
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 6.3e-13 79.3 250 34.4
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 1.4e-12 78.2 223 36.8
C06p51590 Brassica napus HOM05D003240 ORTHO05D103766 1.4e-12 78.2 110 48.2
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 2.4e-12 77.4 354 32.2
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 5.3e-12 76.3 186 40.9
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 5.3e-12 76.3 184 38.0
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 5.3e-12 76.3 120 48.3
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 5.3e-12 76.3 351 31.9
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 1.2e-11 75.1 132 42.4
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.2e-11 75.1 127 46.5
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 1.2e-11 75.1 132 42.4
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 1.5e-11 74.7 102 47.1
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 1.5e-11 74.7 144 41.7
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 2.0e-11 74.3 144 41.7
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 3.4e-11 73.6 141 41.8
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 3.4e-11 73.6 137 42.3
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 3.4e-11 73.6 163 39.3
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 7.6e-11 72.4 238 33.2
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 1.0e-10 72.0 193 36.3
BcaC08g46075 Brassica carinata HOM05D003240 ORTHO05D019967 1.3e-10 71.6 136 38.2
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 2.2e-10 70.9 275 30.9
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 5.0e-10 69.7 115 41.7
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 5.0e-10 69.7 270 31.1
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 5.0e-10 69.7 270 31.1
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 8.5e-10 68.9 270 31.1
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 1.9e-09 67.8 169 36.7
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 3.2e-09 67.0 218 33.5
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 3.2e-09 67.0 267 30.3
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 4.2e-09 66.6 128 40.6
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 4.2e-09 66.6 128 40.6
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 5.5e-09 66.2 141 37.6
C05p02110 Brassica napus HOM05D010928 ORTHO05D002464 7.2e-09 65.9 270 30.4
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 7.2e-09 65.9 267 31.8
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 7.2e-09 65.9 244 31.1
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 9.3e-09 65.5 126 41.3
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 1.2e-08 65.1 172 36.0
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 1.2e-08 65.1 79 49.4
BolC4t25187H Brassica oleracea HOM05D010232 ORTHO05D032714 1.2e-08 65.1 184 36.4
BcaC02g09827 Brassica carinata HOM05D010232 ORTHO05D032714 2.1e-08 64.3 184 36.4
C04p36120 Brassica napus HOM05D010232 ORTHO05D032714 2.1e-08 64.3 184 36.4
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 2.7e-08 63.9 302 32.1
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 4.6e-08 63.2 239 30.1
C07p23280 Brassica napus HOM05D003240 ORTHO05D100423 6.1e-08 62.8 161 34.8
A09p34340 Brassica napus HOM05D012417 ORTHO05D019895 1.0e-07 62.0 58 60.3
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 1.0e-07 62.0 141 36.9
BraA09t38980Z Brassica rapa HOM05D012417 ORTHO05D019895 1.0e-07 62.0 58 60.3
BraA06t25169Z Brassica rapa HOM05D012417 ORTHO05D041300 1.8e-07 61.2 58 60.3
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 3.9e-07 60.1 115 41.7
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 3.9e-07 60.1 193 32.6
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 5.1e-07 59.7 193 33.2
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 5.1e-07 59.7 123 42.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 5.1e-07 59.7 99 42.4
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 5.1e-07 59.7 99 42.4
BolC8t47136H Brassica oleracea HOM05D008956 ORTHO05D016720 6.7e-07 59.3 239 31.8
A02p13040 Brassica napus HOM05D008956 ORTHO05D013254 8.8e-07 58.9 147 36.1
BolC3t16312H Brassica oleracea HOM05D010928 ORTHO05D016821 8.8e-07 58.9 270 29.3
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 8.8e-07 58.9 118 39.8
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 1.1e-06 58.5 103 39.8
BolC7t42862H Brassica oleracea HOM05D003240 ORTHO05D017535 1.9e-06 57.8 161 32.9
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 2.5e-06 57.4 99 42.4
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 4.3e-06 56.6 361 29.1
A07p11540 Brassica napus HOM05D003240 ORTHO05D019967 4.3e-06 56.6 120 37.5
C05p19960 Brassica napus HOM05D003240 ORTHO05D019967 4.3e-06 56.6 120 37.5
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 5.7e-06 56.2 99 40.4
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 5.7e-06 56.2 191 34.0
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 7.4e-06 55.8 102 45.1
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 7.4e-06 55.8 102 45.1
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 7.4e-06 55.8 102 46.1


User provided reference genes

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