Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43238 Brassica carinata HOM05D007244 ORTHO05D094667 1.1e-136 490.0 248 100.0
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 1.0e-28 131.3 236 40.3
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 3.2e-27 126.3 223 40.8
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 3.2e-27 126.3 223 40.8
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 3.3e-16 89.7 162 38.3
BcaB01g03539 Brassica carinata HOM05D007244 ORTHO05D095278 4.8e-15 85.9 197 36.5
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 3.2e-11 73.2 69 56.5
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 3.2e-11 73.2 69 56.5
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 7.2e-11 72.0 103 43.7
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 7.2e-11 72.0 92 46.7
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 2.1e-10 70.5 92 45.7
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 4.7e-10 69.3 123 39.0
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 4.7e-10 69.3 219 33.8
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 6.1e-10 68.9 214 35.0
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 1.1e-08 64.7 55 63.6
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 1.5e-08 64.3 188 31.9
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 2.0e-08 63.9 51 60.8
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 2.0e-08 63.9 131 37.4
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 2.6e-08 63.5 103 42.7
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 2.6e-08 63.5 52 61.5
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 2.6e-08 63.5 68 57.4
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 2.6e-08 63.5 65 52.3
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 3.3e-08 63.2 95 41.1
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 3.3e-08 63.2 219 31.1
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 3.3e-08 63.2 219 31.1
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 3.3e-08 63.2 119 37.0
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 4.4e-08 62.8 104 40.4
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 5.7e-08 62.4 65 50.8
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 7.4e-08 62.0 193 32.1
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-07 60.8 70 47.1
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 1.7e-07 60.8 81 44.4
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 3.7e-07 59.7 222 32.9
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 1.1e-06 58.2 238 31.1
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 1.1e-06 58.2 238 31.1
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 1.4e-06 57.8 178 31.5
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 1.4e-06 57.8 68 42.6
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 1.8e-06 57.4 177 28.8
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 2.4e-06 57.0 116 37.9
BcaB05g21481 Brassica carinata HOM05D000048 ORTHO05D000436 3.1e-06 56.6 97 43.3
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 3.1e-06 56.6 47 61.7
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 3.1e-06 56.6 58 53.4
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 4.1e-06 56.2 212 30.2
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 4.1e-06 56.2 223 34.5
BcaC04g22876 Brassica carinata HOM05D007244 ORTHO05D011635 7.0e-06 55.5 56 48.2
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 9.1e-06 55.1 47 59.6


User provided reference genes

Program Settings