Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 1.1e-311 1072.4 539 100.0
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 9.0e-309 1062.8 539 99.3
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.5e-303 1045.4 539 97.2
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 9.6e-303 1042.7 539 97.4
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 2.5e-295 1018.1 548 94.2
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 2.1e-273 945.3 539 89.8
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.4e-269 932.6 539 89.1
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 2.4e-269 931.8 540 88.3
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 1.2e-268 929.5 542 88.0
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 1.5e-268 929.1 541 88.4
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 2.7e-265 918.3 585 82.1
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 3.6e-265 917.9 541 87.4
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 1.8e-261 905.6 539 85.5
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.1e-250 869.8 539 82.9
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 6.1e-249 864.0 539 82.9
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 8.0e-249 863.6 539 81.8
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 7.0e-245 850.5 540 81.5
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 1.8e-240 835.9 564 77.7
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 2.4e-221 772.3 545 74.1
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.1e-177 626.3 546 59.5
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 6.2e-177 624.8 548 60.9
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.8e-176 623.2 548 60.8
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.0e-174 617.5 548 61.3
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.9e-174 615.1 548 59.9
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 2.1e-172 609.8 549 60.5
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 3.5e-172 609.0 536 58.8
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.0e-171 607.4 548 59.3
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 1.8e-171 606.7 325 93.8
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 6.7e-171 604.7 546 59.3
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 6.7e-171 604.7 547 60.0
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.5e-170 603.6 551 57.9
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.9e-170 603.2 564 57.4
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 7.4e-170 601.3 545 60.4
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 2.2e-169 599.7 554 59.9
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 3.1e-168 595.9 534 57.7
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 2.6e-167 592.8 554 58.1
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 5.0e-166 588.6 541 56.4
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 6.5e-166 588.2 537 58.7
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 1.9e-165 586.6 537 57.2
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 4.6e-164 582.0 549 57.0
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 8.8e-163 577.8 510 59.4
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 1.1e-162 577.4 548 56.6
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 1.5e-162 577.0 533 56.1
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.5e-162 577.0 542 57.0
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 2.0e-162 576.6 521 58.5
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 2.0e-162 576.6 538 58.2
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.5e-162 576.2 542 57.2
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 4.3e-162 575.5 546 55.3
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.7e-162 575.1 533 56.1
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 5.7e-162 575.1 544 57.2
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.3e-161 573.9 533 55.9
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.2e-161 573.2 533 56.3
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.8e-161 572.0 533 55.7
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.1e-160 570.9 556 55.0
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.4e-160 570.5 533 55.9
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 1.4e-160 570.5 543 54.3
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 6.9e-160 568.2 533 55.9
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 9.1e-160 567.8 556 55.8
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 2.0e-159 566.6 551 56.6
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 1.0e-158 564.3 554 56.1
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 1.7e-158 563.5 562 56.0
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 3.8e-158 562.4 557 55.1
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 6.5e-158 561.6 521 57.8
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 5.5e-157 558.5 552 55.4
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 9.4e-157 557.8 551 54.6
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 1.2e-156 557.4 546 54.9
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 3.6e-156 555.8 517 55.7
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 6.1e-156 555.1 551 54.3
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 7.9e-156 554.7 540 53.7
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.5e-154 550.4 542 55.2
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 3.3e-154 549.3 547 53.0
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 5.7e-154 548.5 559 53.3
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 2.8e-153 546.2 550 52.7
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 8.2e-153 544.7 508 57.3
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 8.2e-153 544.7 558 52.9
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 2.4e-152 543.1 504 58.3
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 7.7e-151 538.1 547 53.0
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 1.0e-150 537.7 548 53.8
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 1.3e-150 537.3 550 53.6
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.1e-149 534.3 498 57.0
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 2.5e-149 533.1 550 54.2
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.2e-149 531.6 580 50.3
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 2.3e-147 526.6 564 51.8
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 2.6e-146 523.1 543 53.8
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 2.2e-145 520.0 551 53.0
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.8e-145 519.6 551 52.1
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 4.8e-145 518.8 541 51.9
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 8.2e-145 518.1 558 53.2
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 3.5e-143 512.7 512 52.9
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 6.5e-142 508.4 693 44.7
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.5e-141 507.3 542 52.2
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.9e-141 506.9 564 51.1
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 7.2e-141 505.0 549 53.2
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 1.5e-138 497.3 543 49.2
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 4.1e-136 489.2 542 50.0
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 2.7e-135 486.5 468 54.3
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 4.5e-135 485.7 526 54.4
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 2.1e-132 476.9 548 51.1
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.0e-130 470.3 417 59.0
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 3.7e-129 466.1 444 55.4
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.5e-125 453.4 550 47.1
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 2.3e-123 446.8 539 48.2
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 4.0e-123 446.0 514 48.6
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.0e-118 431.4 566 44.9
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.5e-117 427.6 495 50.7
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.7e-113 412.9 697 41.3
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 1.9e-104 384.0 371 55.3
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 7.1e-104 382.1 360 61.1
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 7.1e-96 355.5 531 39.9
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 9.2e-96 355.1 323 59.1
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.2e-92 344.7 311 60.8
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 1.5e-90 337.8 541 37.9
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 3.5e-87 326.6 346 54.3
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.3e-86 324.7 536 39.2
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.5e-85 320.5 534 40.1
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 9.6e-85 318.5 397 48.6
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 1.3e-84 318.2 361 52.1
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 2.9e-81 307.0 538 36.6
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 3.3e-77 293.5 334 49.7
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 1.6e-76 291.2 360 47.8
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 3.4e-74 283.5 145 94.5
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 1.6e-68 264.6 165 81.2
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 8.1e-68 262.3 341 47.5
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 1.1e-67 261.9 402 42.0
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.6e-52 211.5 201 49.3
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.9e-48 198.0 133 73.7
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 1.9e-48 198.0 143 65.7
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 3.2e-48 197.2 135 71.9
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 1.8e-46 191.4 151 62.9
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.8e-44 184.1 177 48.0
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 9.1e-43 179.1 524 28.8
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.4e-37 160.2 105 71.4
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 4.4e-37 160.2 212 42.5
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.2e-32 144.1 83 81.9
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 3.8e-25 120.6 112 58.0
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 7.5e-21 106.3 125 47.2
unitig_578.g16281 Utricularia gibba HOM05D004567 ORTHO05D005726 1.3e-20 105.5 139 43.9
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 1.8e-19 101.7 99 48.5
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 1.7e-17 95.1 125 40.0
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.4e-16 89.4 53 73.6
BcaB07g33467 Brassica carinata HOM05D004567 ORTHO05D005726 6.1e-15 86.7 56 76.8
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.5e-13 82.0 102 40.2
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.2e-12 78.2 83 55.4
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 2.2e-12 78.2 102 41.2
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.1e-11 73.9 96 42.7
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 9.1e-11 72.8 101 41.6
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.1e-08 65.9 91 39.6
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 3.3e-08 64.3 78 38.5
QL01p003984 Quercus lobata HOM05D004567 ORTHO05D000318 1.2e-07 62.4 73 45.2
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 4.7e-07 60.5 56 48.2
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 8.9e-06 56.2 152 35.5


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