Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43188 Brassica carinata HOM05D000003 ORTHO05D016704 3.1e-53 211.5 101 100.0
BcaC06g30852 Brassica carinata HOM05D000003 ORTHO05D015466 1.4e-26 122.9 93 61.3
BcaNung03952 Brassica carinata HOM05D000003 ORTHO05D016704 1.4e-26 122.9 93 61.3
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-24 115.9 94 56.4
BcaC03g16475 Brassica carinata HOM05D000003 ORTHO05D016704 1.8e-24 115.9 88 67.0
BcaB07g33494 Brassica carinata HOM05D000003 ORTHO05D001498 4.3e-23 111.3 94 52.1
BcaC02g12768 Brassica carinata HOM05D000003 ORTHO05D001498 4.3e-23 111.3 93 58.1
BcaB06g26736 Brassica carinata HOM05D000003 ORTHO05D001498 5.7e-23 110.9 91 60.4
C07p48220 Brassica napus HOM05D000003 ORTHO05D016704 7.4e-23 110.5 93 61.3
BcaC04g24062 Brassica carinata HOM05D000003 ORTHO05D001498 3.7e-22 108.2 93 57.0
BolC7t43105H Brassica oleracea HOM05D000003 ORTHO05D001498 6.3e-22 107.5 93 57.0
BcaB02g10126 Brassica carinata HOM05D000003 ORTHO05D016704 2.4e-21 105.5 94 55.3
BcaB02g10097 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-21 104.8 94 53.2
BcaB07g32628 Brassica carinata HOM05D000003 ORTHO05D001498 6.9e-21 104.0 93 57.0
BolC1t01124H Brassica oleracea HOM05D000003 ORTHO05D001498 9.1e-21 103.6 94 55.3
BcaB02g07030 Brassica carinata HOM05D000003 ORTHO05D015466 1.2e-20 103.2 94 55.3
BcaB04g17607 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-20 102.8 90 58.9
BcaC06g34691 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-20 102.8 92 52.2
BcaC02g07192 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-20 102.1 93 57.0
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-20 101.3 91 52.7
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-20 100.9 94 50.0
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-20 100.9 94 52.1
BcaC08g46757 Brassica carinata HOM05D000003 ORTHO05D001498 1.7e-19 99.4 91 50.5
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-19 99.0 94 50.0
BolC5t32877H Brassica oleracea HOM05D000003 ORTHO05D001498 5.0e-19 97.8 94 50.0
BcaB04g18838 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-19 97.4 94 52.1
BcaNung05100 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-19 97.4 92 48.9
BcaB02g07356 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-19 97.1 94 51.1
BcaC03g18169 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-19 97.1 94 51.1
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-18 96.7 94 50.0
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-18 96.3 94 50.0
BcaC08g43351 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-18 96.3 94 51.1
BraA09t38728Z Brassica rapa HOM05D000003 ORTHO05D001498 3.2e-18 95.1 90 54.4
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 5.5e-18 94.4 94 50.0
BcaC08g45717 Brassica carinata HOM05D000003 ORTHO05D016704 5.5e-18 94.4 78 61.5
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-17 92.0 94 48.9
Thhalv10009777m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 4.7e-17 91.3 92 51.1
Thhalv10026817m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 3.9e-16 88.2 92 48.9
BcaC04g20486 Brassica carinata HOM05D000003 ORTHO05D001498 5.1e-16 87.8 94 50.0
BcaC01g06159 Brassica carinata HOM05D000003 ORTHO05D001498 6.7e-16 87.4 93 51.6
BraA02t07610Z Brassica rapa HOM05D000003 ORTHO05D001498 8.8e-16 87.0 91 49.5
BcaNung00269 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-15 86.7 95 48.4
BolC3t14078H Brassica oleracea HOM05D000003 ORTHO05D016704 3.3e-15 85.1 94 50.0
BcaB04g19028 Brassica carinata HOM05D000003 ORTHO05D000004 5.7e-15 84.3 92 50.0
BcaC04g19633 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-12 75.9 90 40.0
BcaC03g13586 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-12 75.1 91 48.4
Sp6g10470 Schrenkiella parvula HOM05D000003 ORTHO05D001498 3.5e-12 75.1 91 38.5
BolC4t25304H Brassica oleracea HOM05D000003 ORTHO05D016704 5.9e-12 74.3 70 51.4
BcaC05g29352 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-12 73.9 95 40.0
BcaC05g25363 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-11 73.6 90 38.9
BcaC09g51068 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-11 73.6 89 40.4
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-11 73.2 91 44.0
BolC2t08182H Brassica oleracea HOM05D000003 ORTHO05D016704 1.3e-11 73.2 74 51.4
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 1.7e-11 72.8 87 41.4
BcaB07g33516 Brassica carinata HOM05D000003 ORTHO05D000004 2.2e-11 72.4 92 39.1
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 2.9e-11 72.0 90 38.9
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-11 72.0 93 45.2
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 3.8e-11 71.6 88 43.2
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 3.8e-11 71.6 88 43.2
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 3.8e-11 71.6 91 42.9
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 3.8e-11 71.6 85 42.4
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 5.0e-11 71.2 92 40.2
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 5.0e-11 71.2 92 41.3
BcaC05g24575 Brassica carinata HOM05D000003 ORTHO05D001498 5.0e-11 71.2 90 44.4
C07p15960 Brassica napus HOM05D009133 ORTHO05D016102 5.0e-11 71.2 89 40.4
C07p15980 Brassica napus HOM05D009133 ORTHO05D016102 5.0e-11 71.2 89 40.4
Sp6g06080 Schrenkiella parvula HOM05D000003 ORTHO05D001498 5.0e-11 71.2 91 44.0
Sp7g03745 Schrenkiella parvula HOM05D000003 ORTHO05D001498 5.0e-11 71.2 92 41.3
BcaC06g35222 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-11 70.9 85 43.5
AL7G44730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 8.5e-11 70.5 74 45.9
BcaC09g49254 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-10 70.1 92 40.2
C02p54220 Brassica napus HOM05D009133 ORTHO05D016102 1.5e-10 69.7 89 39.3
BraA10t45387Z Brassica rapa HOM05D000003 ORTHO05D027722 1.9e-10 69.3 89 37.1
BcaB06g25892 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-10 68.9 87 40.2
BcaC06g36425 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-10 68.9 99 43.4
BcaC01g05810 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-10 68.6 90 42.2
BcaC09g51035 Brassica carinata HOM05D000003 ORTHO05D000004 5.5e-10 67.8 89 42.7
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 7.2e-10 67.4 93 40.9
BcaNung03323 Brassica carinata HOM05D000003 ORTHO05D016015 7.2e-10 67.4 91 42.9
BcaC03g15901 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-10 67.0 90 43.3
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-10 67.0 91 35.2
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 9.4e-10 67.0 91 40.7
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 9.4e-10 67.0 91 35.2
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 9.4e-10 67.0 91 35.2
Sp4g06690 Schrenkiella parvula HOM05D000003 ORTHO05D001498 9.4e-10 67.0 91 39.6
BcaC07g41849 Brassica carinata HOM05D000003 ORTHO05D027177 1.2e-09 66.6 91 36.3
BcaC02g12838 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-09 66.2 83 43.4
BcaC05g28118 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-09 66.2 83 44.6
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 1.6e-09 66.2 81 39.5
BcaC04g23808 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-09 65.9 90 37.8
BcaC08g44324 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-09 65.9 89 41.6
BcaB08g35769 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-09 65.5 67 52.2
BcaC01g01503 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-09 65.5 89 43.8
BcaC01g01226 Brassica carinata HOM05D000003 ORTHO05D001498 3.6e-09 65.1 89 36.0
BcaC08g45918 Brassica carinata HOM05D000003 ORTHO05D016102 3.6e-09 65.1 89 36.0
BolC3t21277H Brassica oleracea HOM05D000003 ORTHO05D016043 3.6e-09 65.1 89 36.0
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 3.6e-09 65.1 92 33.7
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 4.7e-09 64.7 78 39.7
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 6.1e-09 64.3 96 40.6
BcaC04g19472 Brassica carinata HOM05D000003 ORTHO05D001498 6.1e-09 64.3 92 38.0
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 6.1e-09 64.3 96 40.6
BraA09t36313Z Brassica rapa HOM05D000003 ORTHO05D001498 6.1e-09 64.3 78 44.9
BraA09t38311Z Brassica rapa HOM05D000003 ORTHO05D001498 6.1e-09 64.3 88 38.6
Sp2g02350 Schrenkiella parvula HOM05D000003 ORTHO05D001498 6.1e-09 64.3 94 33.0
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 8.0e-09 63.9 77 42.9
BcaB08g36343 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-08 63.5 87 37.9
BcaC01g05506 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-08 63.5 86 45.3
C07p34510 Brassica napus HOM05D009133 ORTHO05D016102 1.0e-08 63.5 89 38.2
BolC7t43982H Brassica oleracea HOM05D009133 ORTHO05D016102 1.0e-08 63.5 89 38.2
BolC7t44586H Brassica oleracea HOM05D000003 ORTHO05D016043 1.0e-08 63.5 89 34.8
BcaC04g21635 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 63.2 80 41.2
BcaC06g34829 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 63.2 90 34.4
BcaC08g46350 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-08 63.2 92 38.0
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 1.4e-08 63.2 82 39.0
C06p40810 Brassica napus HOM05D000003 ORTHO05D001498 1.4e-08 63.2 92 38.0
BolC6t39352H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-08 63.2 92 38.0
BolC7t42827H Brassica oleracea HOM05D000003 ORTHO05D016043 1.4e-08 63.2 90 34.4
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 1.4e-08 63.2 82 39.0
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 1.4e-08 63.2 82 39.0
BcaB03g15480 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 62.8 74 48.6
BcaC05g27727 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 62.8 84 41.7
BcaC09g50877 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-08 62.8 74 47.3
BcaB05g24840 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-08 62.4 89 34.8
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-08 62.4 82 37.8
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 2.3e-08 62.4 79 39.2
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 2.3e-08 62.4 82 37.8
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-08 62.0 92 38.0
BcaB07g33613 Brassica carinata HOM05D000003 ORTHO05D000004 3.0e-08 62.0 88 33.0
BcaB08g35581 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-08 61.6 89 39.3
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 4.0e-08 61.6 93 37.6
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 4.0e-08 61.6 82 37.8
BcaB05g22670 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-08 61.2 74 45.9
BcaC09g48469 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-08 61.2 85 41.2
BraA07t30824Z Brassica rapa HOM05D000003 ORTHO05D027722 5.2e-08 61.2 82 37.8
BcaB01g02800 Brassica carinata HOM05D000003 ORTHO05D027722 6.7e-08 60.8 89 34.8
BcaC01g01442 Brassica carinata HOM05D000003 ORTHO05D001498 6.7e-08 60.8 90 41.1
C06p09100 Brassica napus HOM05D009133 ORTHO05D016102 6.7e-08 60.8 89 37.1
BolC3t16805H Brassica oleracea HOM05D000003 ORTHO05D016043 6.7e-08 60.8 90 32.2
BolC8t52030H Brassica oleracea HOM05D000003 ORTHO05D001498 6.7e-08 60.8 80 40.0
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 8.8e-08 60.5 86 41.9
C09p25590 Brassica napus HOM05D000003 ORTHO05D019990 8.8e-08 60.5 88 40.9
BcaC09g47726 Brassica carinata HOM05D000003 ORTHO05D016043 1.1e-07 60.1 90 33.3
BcaC09g47764 Brassica carinata HOM05D000003 ORTHO05D016043 1.1e-07 60.1 90 33.3
BolC2t10194H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-07 60.1 72 47.2
BcaC01g04069 Brassica carinata HOM05D000003 ORTHO05D016043 2.0e-07 59.3 90 33.3
BcaC06g35212 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-07 59.3 88 38.6
BcaC03g15697 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 58.2 88 37.5
BcaC03g15807 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 58.2 88 38.6
BcaC04g19261 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 58.2 89 36.0
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 5.7e-07 57.8 92 37.0
BraA02t06299Z Brassica rapa HOM05D000003 ORTHO05D016704 5.7e-07 57.8 63 47.6
Carub.0007s3605 Capsella rubella HOM05D000003 ORTHO05D001498 1.7e-06 56.2 91 37.4
BraA06t24122Z Brassica rapa HOM05D000003 ORTHO05D016043 2.2e-06 55.8 81 34.6
Sp5g28990 Schrenkiella parvula HOM05D000003 ORTHO05D001498 2.2e-06 55.8 80 37.5
BcaB01g02363 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-06 55.5 91 38.5
BolC9t54945H Brassica oleracea HOM05D000003 ORTHO05D027722 2.8e-06 55.5 82 35.4
BcaB03g16371 Brassica carinata HOM05D000003 ORTHO05D015466 3.7e-06 55.1 94 29.8
BcaB07g33967 Brassica carinata HOM05D000003 ORTHO05D027177 3.7e-06 55.1 75 37.3
BcaC02g12259 Brassica carinata HOM05D000003 ORTHO05D027177 6.3e-06 54.3 75 41.3
C04p24260 Brassica napus HOM05D000003 ORTHO05D014927 6.3e-06 54.3 76 38.2
BcaB02g09892 Brassica carinata HOM05D000003 ORTHO05D001498 8.2e-06 53.9 82 37.8
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 8.2e-06 53.9 80 40.0
BolC4t23924H Brassica oleracea HOM05D000003 ORTHO05D014927 8.2e-06 53.9 76 38.2


User provided reference genes

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