Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 2.7e-115 418.7 213 100.0
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 2.7e-115 418.7 213 100.0
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 3.0e-114 415.2 213 99.1
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 1.5e-113 412.9 213 98.1
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 9.6e-113 410.2 213 97.7
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 3.6e-112 408.3 213 97.2
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 1.7e-93 346.3 217 86.2
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 9.3e-92 340.5 216 85.2
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 2.1e-91 339.3 217 84.3
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 2.1e-91 339.3 219 86.8
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 1.8e-90 336.3 215 87.0
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 2.8e-88 328.9 219 84.0
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 2.4e-87 325.9 216 82.4
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 4.5e-86 321.6 216 83.8
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 7.6e-86 320.9 216 82.4
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 1.7e-85 319.7 216 81.9
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 2.5e-68 262.7 216 67.6
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.3e-66 256.1 152 86.2
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 2.5e-60 236.1 144 88.2
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 6.5e-53 211.5 210 59.0
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 8.0e-51 204.5 224 55.4
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 5.2e-50 201.8 207 55.6
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 8.8e-50 201.1 204 56.4
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 8.8e-50 201.1 204 56.4
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 1.1e-49 200.7 222 55.0
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.5e-49 200.3 204 56.9
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 3.3e-49 199.1 203 56.7
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 4.4e-49 198.7 182 58.8
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 4.4e-49 198.7 225 52.4
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 7.5e-49 198.0 189 59.8
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 7.5e-49 198.0 204 55.4
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 6.3e-48 194.9 227 51.1
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 6.3e-48 194.9 213 51.6
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 8.2e-48 194.5 204 55.4
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 8.2e-48 194.5 234 50.9
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 1.1e-47 194.1 151 67.5
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 1.4e-47 193.7 160 63.8
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 2.4e-47 193.0 214 56.5
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 4.1e-47 192.2 197 57.9
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 4.1e-47 192.2 189 56.6
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 5.3e-47 191.8 159 61.6
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 5.3e-47 191.8 205 53.2
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 7.0e-47 191.4 171 62.0
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 7.0e-47 191.4 201 57.2
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 9.1e-47 191.0 214 52.3
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 2.0e-46 189.9 163 64.4
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 2.7e-46 189.5 213 54.9
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 2.7e-46 189.5 189 55.0
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 3.5e-46 189.1 217 52.1
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 4.5e-46 188.7 188 56.4
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 4.5e-46 188.7 155 63.2
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 5.9e-46 188.3 226 51.3
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 5.9e-46 188.3 183 57.9
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 1.0e-45 187.6 217 52.1
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 1.0e-45 187.6 158 65.8
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 1.3e-45 187.2 156 64.7
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 1.7e-45 186.8 156 63.5
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 1.7e-45 186.8 215 50.2
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 3.8e-45 185.7 197 55.3
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 5.0e-45 185.3 199 52.3
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 5.0e-45 185.3 183 54.6
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 5.0e-45 185.3 224 52.7
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 5.0e-45 185.3 191 52.9
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 6.5e-45 184.9 160 62.5
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 6.5e-45 184.9 163 61.3
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 1.1e-44 184.1 158 61.4
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 1.1e-44 184.1 197 54.3
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 1.1e-44 184.1 182 57.1
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 1.5e-44 183.7 159 60.4
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.9e-44 183.3 212 54.2
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 1.9e-44 183.3 159 59.7
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.5e-44 183.0 155 63.9
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 2.5e-44 183.0 154 62.3
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 2.5e-44 183.0 159 59.7
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 2.5e-44 183.0 227 49.3
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 4.2e-44 182.2 237 50.6
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 4.2e-44 182.2 152 65.8
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 5.5e-44 181.8 189 55.0
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 7.2e-44 181.4 199 51.8
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 9.4e-44 181.0 199 51.8
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 1.2e-43 180.6 218 50.9
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 1.6e-43 180.3 159 58.5
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 1.6e-43 180.3 159 61.6
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 1.6e-43 180.3 203 50.7
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 2.1e-43 179.9 191 53.9
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 2.7e-43 179.5 158 58.9
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 2.7e-43 179.5 186 55.4
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 3.6e-43 179.1 191 52.4
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 3.6e-43 179.1 224 47.8
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 1.8e-42 176.8 196 51.0
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 2.3e-42 176.4 221 49.8
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 2.3e-42 176.4 180 56.1
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 3.0e-42 176.0 159 59.7
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 4.0e-42 175.6 211 50.7
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 5.2e-42 175.3 152 61.8
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 1.5e-41 173.7 214 50.9
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 1.5e-41 173.7 153 62.1
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.0e-41 173.3 163 60.1
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.0e-41 173.3 163 60.1
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 5.7e-41 171.8 177 55.9
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 6.3e-40 168.3 169 56.8
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 8.3e-40 167.9 188 48.9
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 1.8e-39 166.8 152 59.2
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 4.1e-39 165.6 188 48.4
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 3.5e-38 162.5 153 56.2
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 8.5e-37 157.9 177 51.4
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 1.5e-36 157.1 139 61.2
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 1.2e-35 154.1 191 44.5
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 1.4e-34 150.6 145 57.9
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 2.3e-34 149.8 161 51.6
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 6.8e-34 148.3 162 50.0
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 3.4e-33 146.0 155 52.3
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 1.7e-32 143.7 150 56.7
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 2.2e-32 143.3 140 52.1
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 8.3e-32 141.4 142 54.2
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 2.5e-28 129.8 197 45.2
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 9.5e-28 127.9 129 58.9
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 9.5e-28 127.9 177 41.8
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 2.1e-27 126.7 145 51.7
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 4.7e-27 125.6 113 64.6
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 1.0e-26 124.4 187 46.0
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 3.0e-26 122.9 149 47.0
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 5.2e-26 122.1 191 44.0
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 6.8e-26 121.7 146 52.1
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 5.4e-23 112.1 81 65.4
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 7.0e-23 111.7 163 42.3
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 2.7e-22 109.8 108 56.5
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 6.6e-21 105.1 209 38.3
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 5.2e-18 95.5 146 43.2
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 6.8e-18 95.1 97 56.7
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 3.7e-16 89.4 53 86.8
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 4.1e-15 85.9 148 39.9
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 1.2e-14 84.3 152 42.8
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 1.7e-13 80.5 86 52.3
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 5.0e-13 79.0 82 58.5
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-12 77.8 71 53.5
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 1.1e-12 77.8 80 56.2
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 7.3e-12 75.1 113 41.6
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 9.5e-12 74.7 79 57.0
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 9.5e-12 74.7 196 31.6
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 6.2e-11 72.0 82 53.7
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 8.1e-11 71.6 200 34.0
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 3.1e-10 69.7 84 53.6
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 1.5e-09 67.4 85 48.2
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 7.5e-09 65.1 118 42.4
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 5.4e-07 58.9 137 35.8
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 6.0e-06 55.5 131 32.8
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 6.0e-06 55.5 32 71.9
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 7.8e-06 55.1 34 73.5


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