Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 3.2e-240 834.7 439 100.0
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 4.2e-232 807.7 424 100.0
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 2.2e-228 795.4 427 98.1
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 1.1e-224 783.1 420 98.3
A08p33950 Brassica napus HOM05D015039 ORTHO05D011322 1.9e-176 622.9 367 88.0
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 1.1e-174 617.1 439 81.3
BcaC02g10267 Brassica carinata HOM05D015039 ORTHO05D011322 2.4e-171 605.9 321 98.8
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 2.1e-98 363.6 242 83.1
A05p43920 Brassica napus HOM05D015039 ORTHO05D011322 1.6e-69 267.7 158 85.4
A03p13580 Brassica napus HOM05D012600 ORTHO05D039409 3.4e-48 196.8 387 43.9
BNapus_Darmor_BZH_scaffold_38p02020 Brassica napus HOM05D008872 ORTHO05D011322 7.4e-35 152.5 165 58.8
BolC2t06990H Brassica oleracea HOM05D008872 ORTHO05D011322 7.4e-35 152.5 165 58.8
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 1.7e-31 141.4 114 68.4
C08p52410 Brassica napus HOM05D008872 ORTHO05D011322 1.1e-30 138.7 155 53.5
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 1.6e-29 134.8 160 50.6
BolC7t43612H Brassica oleracea HOM05D008872 ORTHO05D011322 1.4e-28 131.7 155 51.6
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 6.7e-28 129.4 119 63.9
C05p01530 Brassica napus HOM05D008872 ORTHO05D011322 8.8e-28 129.0 114 65.8
BcaC03g17687 Brassica carinata HOM05D034399 ORTHO05D031762 8.2e-26 122.5 183 46.4
C02p56960 Brassica napus HOM05D034399 ORTHO05D031762 8.2e-26 122.5 183 46.4
BolC2t11764H Brassica oleracea HOM05D034399 ORTHO05D031762 8.2e-26 122.5 183 46.4
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 4.1e-25 120.2 136 52.9
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 5.3e-25 119.8 136 52.2
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 6.9e-25 119.4 102 66.7
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 6.9e-25 119.4 136 52.2
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 9.1e-25 119.0 89 73.0
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 2.0e-24 117.9 171 45.0
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 2.6e-24 117.5 167 47.9
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 7.7e-24 115.9 115 58.3
C09p54490 Brassica napus HOM05D008872 ORTHO05D011322 1.0e-23 115.5 101 66.3
BcaC01g05406 Brassica carinata HOM05D008872 ORTHO05D011322 2.2e-23 114.4 142 49.3
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 2.9e-23 114.0 133 53.4
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 4.5e-16 90.1 123 48.0
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 2.2e-15 87.8 88 60.2
BraA09t38766Z Brassica rapa HOM05D012600 ORTHO05D024069 4.7e-13 80.1 80 61.2
BolC3t13168H Brassica oleracea HOM05D012600 ORTHO05D024069 1.5e-11 75.1 74 62.2
A09p32210 Brassica napus HOM05D012600 ORTHO05D024069 2.0e-11 74.7 74 62.2
BcaC08g46330 Brassica carinata HOM05D012600 ORTHO05D039409 7.5e-11 72.8 81 59.3
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 9.1e-09 65.9 53 67.9
C07p31980 Brassica napus HOM05D008872 ORTHO05D039385 1.0e-07 62.4 100 38.0
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 2.9e-07 60.8 142 37.3
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 6.5e-07 59.7 146 34.2
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 6.5e-07 59.7 88 46.6
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 8.5e-07 59.3 88 46.6
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 2.5e-06 57.8 147 32.7
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 2.5e-06 57.8 147 32.7
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 3.2e-06 57.4 66 51.5
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 3.2e-06 57.4 66 51.5
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 3.2e-06 57.4 108 38.0
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 4.2e-06 57.0 148 31.8


User provided reference genes

Program Settings