Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 9.2e-78 293.5 150 100.0
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 9.2e-78 293.5 150 100.0
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 3.5e-77 291.6 150 98.7
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.9e-70 269.2 150 91.3
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.9e-70 269.2 150 91.3
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 3.5e-69 265.0 154 90.3
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.7e-63 246.1 150 86.0
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.7e-63 245.0 153 83.0
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.4e-62 242.3 150 84.7
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 4.1e-62 241.5 154 82.5
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 1.2e-61 240.0 154 82.5
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.6e-61 239.6 150 82.0
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.3e-60 236.5 154 81.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 1.1e-59 233.4 152 82.2
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 3.9e-52 208.4 149 73.8
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 6.6e-52 207.6 124 83.1
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 9.9e-48 193.7 127 74.0
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 9.9e-48 193.7 127 74.0
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 4.9e-47 191.4 128 71.1
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.9e-46 189.5 140 67.9
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.6e-45 186.4 140 67.9
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 7.8e-45 184.1 140 67.1
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 3.9e-44 181.8 125 72.8
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 6.6e-44 181.0 123 69.9
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.5e-43 179.9 118 74.6
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.9e-43 179.5 121 70.2
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 4.3e-43 178.3 114 76.3
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 4.3e-43 178.3 134 67.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 5.6e-43 177.9 133 69.2
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 5.6e-43 177.9 133 69.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 5.6e-43 177.9 140 63.6
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 7.3e-43 177.6 122 73.8
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.3e-42 176.8 115 74.8
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.6e-42 176.4 118 71.2
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 4.8e-42 174.9 124 70.2
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 4.8e-42 174.9 126 69.0
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.2e-42 174.5 126 66.7
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 6.2e-42 174.5 126 66.7
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 6.2e-42 174.5 139 64.7
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 8.1e-42 174.1 142 64.8
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 1.1e-41 173.7 133 61.7
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 1.4e-41 173.3 142 61.3
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.4e-41 173.3 138 63.8
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 1.4e-41 173.3 124 68.5
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.8e-41 172.9 118 70.3
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 2.4e-41 172.6 125 68.8
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 4.0e-41 171.8 133 60.9
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.2e-40 170.2 127 67.7
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.2e-40 170.2 117 70.1
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.2e-40 170.2 133 65.4
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 1.2e-40 170.2 138 58.7
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 1.2e-40 170.2 138 58.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 1.2e-40 170.2 144 59.7
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.0e-40 169.5 144 59.7
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.0e-40 169.5 144 59.7
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 2.6e-40 169.1 121 67.8
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 2.6e-40 169.1 117 70.1
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 2.6e-40 169.1 123 67.5
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 4.5e-40 168.3 136 58.1
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 4.5e-40 168.3 129 68.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 5.8e-40 167.9 118 66.9
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 1.3e-39 166.8 119 71.4
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.3e-39 166.8 133 65.4
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.3e-39 166.8 118 69.5
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 1.7e-39 166.4 117 69.2
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 2.2e-39 166.0 189 50.3
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.9e-39 165.6 124 64.5
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 4.9e-39 164.9 118 72.0
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 4.9e-39 164.9 112 70.5
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 4.9e-39 164.9 159 55.3
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 6.4e-39 164.5 129 62.0
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.4e-39 164.5 117 66.7
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 6.4e-39 164.5 141 62.4
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 2.4e-38 162.5 136 59.6
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 3.2e-38 162.2 141 60.3
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 4.2e-38 161.8 131 62.6
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.2e-37 160.2 126 61.9
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.6e-37 159.8 127 62.2
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 3.5e-37 158.7 112 66.1
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 6.0e-37 157.9 129 61.2
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 7.9e-37 157.5 119 67.2
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.8e-36 156.4 131 59.5
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 3.9e-36 155.2 144 59.7
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 6.7e-36 154.5 122 62.3
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 1.6e-34 149.8 135 58.5
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.4e-33 146.7 122 62.3
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 7.6e-32 141.0 116 62.1
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 2.9e-31 139.0 95 67.4
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 4.9e-31 138.3 98 68.4
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 2.4e-30 136.0 89 70.8
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 2.7e-29 132.5 122 57.4
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.0e-28 130.6 117 59.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.8e-28 129.8 102 65.7
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 5.1e-28 128.3 117 58.1
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 1.5e-27 126.7 121 52.9
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.9e-27 126.3 113 58.4
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 7.4e-27 124.4 133 53.4
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 2.1e-26 122.9 126 53.2
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.8e-26 122.5 84 71.4
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.8e-25 119.8 115 50.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 2.4e-25 119.4 87 66.7
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.5e-24 116.7 133 44.4
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.2e-23 112.8 101 56.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.4e-22 110.2 76 71.1
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.6e-21 106.7 70 74.3
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 2.1e-21 106.3 112 50.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 8.2e-18 94.4 61 75.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.0e-15 87.4 68 61.8
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.2e-15 86.3 53 77.4
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 3.2e-14 82.4 48 85.4
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.1e-13 79.7 55 70.9
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 2.7e-13 79.3 62 61.3
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 9.7e-11 70.9 102 36.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 9.7e-11 70.9 92 47.8
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 1.3e-10 70.5 79 54.4
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 2.6e-08 62.8 62 48.4
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 1.4e-06 57.0 59 59.3


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