Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 1.1e-44 183.0 92 100.0
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 4.5e-43 177.6 92 96.7
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 8.5e-34 146.7 95 85.3
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 3.2e-33 144.8 92 80.4
C06p02170 Brassica napus HOM05D007627 ORTHO05D009640 3.7e-29 131.3 92 76.1
A10p06200 Brassica napus HOM05D007627 ORTHO05D009640 8.2e-29 130.2 92 75.0
BraA10t42888Z Brassica rapa HOM05D007627 ORTHO05D009640 8.2e-29 130.2 92 75.0
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 4.5e-27 124.4 98 73.5
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 4.5e-27 124.4 96 72.9
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 7.7e-27 123.6 97 71.1
BolC6t35346H Brassica oleracea HOM05D007627 ORTHO05D009640 3.8e-26 121.3 92 71.7
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 5.5e-25 117.5 98 70.4
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 1.8e-23 112.5 90 66.7
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 3.0e-23 111.7 99 70.7
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 8.8e-23 110.2 97 69.1
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 1.6e-19 99.4 93 57.0
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 3.8e-18 94.7 93 58.1
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 5.0e-18 94.4 93 54.8
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 1.9e-17 92.4 93 58.1
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 4.2e-17 91.3 91 53.8
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 4.7e-16 87.8 92 53.3
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 8.0e-16 87.0 93 52.7
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 1.4e-15 86.3 93 55.9
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 3.0e-15 85.1 93 48.4
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 4.0e-15 84.7 93 51.6
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 5.2e-15 84.3 91 53.8
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.2e-15 84.3 91 53.8
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 6.8e-15 84.0 91 49.5
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 6.8e-15 84.0 93 52.7
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 8.8e-15 83.6 83 53.0
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.2e-14 83.2 86 54.7
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.5e-14 82.8 93 51.6
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.5e-14 82.8 91 53.8
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.6e-14 82.0 92 50.0
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 2.6e-14 82.0 84 51.2
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 2.6e-14 82.0 97 51.5
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 3.4e-14 81.6 65 66.2
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 5.7e-14 80.9 93 52.7
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 5.7e-14 80.9 96 52.1
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 9.8e-14 80.1 77 57.1
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 9.8e-14 80.1 83 51.8
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.3e-13 79.7 84 50.0
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-13 79.7 91 52.7
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 3.7e-13 78.2 61 67.2
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 4.9e-13 77.8 84 48.8
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 4.9e-13 77.8 83 54.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 6.3e-13 77.4 77 59.7
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 6.3e-13 77.4 92 48.9
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 6.3e-13 77.4 90 48.9
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 8.3e-13 77.0 82 57.3
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 8.3e-13 77.0 93 51.6
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 1.1e-12 76.6 78 56.4
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 1.4e-12 76.3 85 51.8
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 1.4e-12 76.3 85 51.8
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 1.4e-12 76.3 90 47.8
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 2.4e-12 75.5 83 44.6
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 3.1e-12 75.1 88 50.0
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 3.1e-12 75.1 90 47.8
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 4.1e-12 74.7 92 45.7
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 4.1e-12 74.7 93 49.5
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 4.1e-12 74.7 76 52.6
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 5.4e-12 74.3 81 53.1
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 5.4e-12 74.3 83 49.4
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 5.4e-12 74.3 92 47.8
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 1.2e-11 73.2 82 50.0
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.2e-11 73.2 79 53.2
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 1.2e-11 73.2 94 47.9
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 2.7e-11 72.0 92 48.9
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 3.5e-11 71.6 82 46.3
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 3.5e-11 71.6 79 51.9
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 3.5e-11 71.6 78 52.6
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 3.5e-11 71.6 92 44.6
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 4.5e-11 71.2 76 55.3
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-11 71.2 72 50.0
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 5.9e-11 70.9 92 47.8
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 5.9e-11 70.9 92 46.7
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 7.8e-11 70.5 75 50.7
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.0e-10 70.1 92 44.6
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.0e-10 70.1 77 49.4
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.7e-10 69.3 76 56.6
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 2.3e-10 68.9 92 43.5
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 3.8e-10 68.2 83 48.2
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 5.0e-10 67.8 76 55.3
AT1G47813 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 6.6e-10 67.4 94 53.2
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 8.6e-10 67.0 75 53.3
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 8.6e-10 67.0 61 59.0
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 8.6e-10 67.0 90 43.3
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 1.1e-09 66.6 89 47.2
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 1.5e-09 66.2 77 50.6
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.9e-09 65.9 78 50.0
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 4.3e-09 64.7 63 52.4
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 4.3e-09 64.7 90 44.4
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 5.6e-09 64.3 98 43.9
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 7.3e-09 63.9 78 44.9
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 9.5e-09 63.5 78 47.4
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.6e-08 62.8 75 49.3
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 1.6e-08 62.8 76 43.4
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 4.7e-08 61.2 79 43.0
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 56.2 72 36.1
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 5.7e-06 54.3 88 44.3


User provided reference genes

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