Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 2.6e-235 818.5 477 100.0
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 7.2e-193 677.6 564 75.2
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 1.1e-143 514.2 507 68.0
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 3.7e-141 505.8 505 62.0
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 4.8e-112 409.1 529 51.8
BraA09t38753Z Brassica rapa HOM05D008825 ORTHO05D013031 2.5e-89 333.6 349 71.1
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 1.1e-87 328.2 212 78.8
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 8.8e-82 308.5 513 46.6
A07p06500 Brassica napus HOM05D008825 ORTHO05D013031 6.5e-77 292.4 338 67.5
C03p67180 Brassica napus HOM05D008825 ORTHO05D013031 1.2e-75 288.1 266 77.8
BcaC01g02271 Brassica carinata HOM05D008825 ORTHO05D015484 2.1e-51 207.6 185 83.8
C06p00230 Brassica napus HOM05D008825 ORTHO05D015484 1.5e-44 184.9 164 99.4
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 7.3e-44 182.6 364 37.1
A09p02690 Brassica napus HOM05D008825 ORTHO05D013031 7.3e-44 182.6 239 68.6
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 6.8e-42 176.0 252 44.8
C05p27980 Brassica napus HOM05D008825 ORTHO05D015484 1.2e-41 175.3 162 89.5
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 2.6e-41 174.1 253 44.7
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 4.4e-41 173.3 260 44.2
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 5.7e-41 172.9 256 43.0
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 9.8e-41 172.2 382 36.4
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 8.3e-40 169.1 300 40.3
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 2.4e-39 167.5 263 41.8
BcaC09g49872 Brassica carinata HOM05D008825 ORTHO05D015484 2.8e-35 154.1 171 73.1
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 2.3e-34 151.0 163 50.9
C05p21530 Brassica napus HOM05D008825 ORTHO05D015484 4.0e-34 150.2 117 84.6
BolC5t30847H Brassica oleracea HOM05D008825 ORTHO05D015484 1.4e-31 141.7 153 71.2
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 2.4e-31 141.0 153 49.7
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 2.0e-30 137.9 167 46.1
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.8e-30 136.0 249 34.9
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.0e-29 135.6 245 33.9
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.0e-29 135.6 245 33.9
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.7e-29 134.8 238 35.7
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 3.0e-29 134.0 179 46.4
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 3.0e-29 134.0 227 40.1
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 8.6e-29 132.5 141 48.9
BolC1t03790H Brassica oleracea HOM05D008825 ORTHO05D013031 1.9e-28 131.3 110 66.4
BolC5t32272H Brassica oleracea HOM05D008825 ORTHO05D013031 1.9e-28 131.3 110 66.4
BraA03t14478Z Brassica rapa HOM05D008825 ORTHO05D013031 1.9e-28 131.3 110 66.4
BolC1t04270H Brassica oleracea HOM05D008825 ORTHO05D013031 7.3e-28 129.4 110 65.5
BcaC05g28053 Brassica carinata HOM05D008825 ORTHO05D095658 9.5e-28 129.0 125 84.0
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 4.7e-27 126.7 374 31.8
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 8.1e-27 125.9 257 34.6
BolC3t19769H Brassica oleracea HOM05D008825 ORTHO05D015484 8.9e-26 122.5 145 73.1
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 8.9e-26 122.5 258 33.7
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.6e-25 120.9 184 35.3
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 3.4e-25 120.6 264 35.2
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 3.4e-25 120.6 264 35.2
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 3.4e-25 120.6 205 36.1
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 4.4e-25 120.2 266 35.0
BolC8t47017H Brassica oleracea HOM05D008825 ORTHO05D013031 4.9e-24 116.7 104 63.5
BolC3t19768H Brassica oleracea HOM05D008825 ORTHO05D013031 6.4e-24 116.3 104 63.5
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 8.3e-24 115.9 234 33.8
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 1.4e-23 115.2 66 74.2
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 1.9e-23 114.8 265 34.3
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 3.2e-23 114.0 225 36.0
C02p14930 Brassica napus HOM05D008316 ORTHO05D014956 5.4e-23 113.2 88 65.9
BcaC07g39489 Brassica carinata HOM05D009532 ORTHO05D013511 7.1e-23 112.8 343 40.5
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 7.1e-23 112.8 231 33.3
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 7.1e-23 112.8 232 32.3
BolC3t15775H Brassica oleracea HOM05D008825 ORTHO05D013031 1.6e-22 111.7 104 61.5
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-22 111.7 254 32.3
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-22 111.7 231 33.3
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 2.7e-22 110.9 231 32.9
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-22 110.5 142 41.5
BraA07t28445Z Brassica rapa HOM05D008825 ORTHO05D013031 4.6e-22 110.2 104 61.5
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 6.0e-22 109.8 117 56.4
BcaC02g08561 Brassica carinata HOM05D008316 ORTHO05D014956 7.8e-22 109.4 82 67.1
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 1.0e-21 109.0 277 33.6
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 1.3e-21 108.6 66 71.2
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 2.3e-21 107.8 203 36.0
BolC4t26823H Brassica oleracea HOM05D008316 ORTHO05D014956 3.0e-21 107.5 97 60.8
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 3.0e-21 107.5 231 32.0
BraA08t32672Z Brassica rapa HOM05D008316 ORTHO05D014956 6.6e-21 106.3 77 68.8
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 5.6e-20 103.2 158 39.9
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.3e-20 102.8 238 29.8
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 7.3e-20 102.8 136 41.9
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 1.6e-19 101.7 296 31.8
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 2.8e-19 100.9 210 34.3
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 2.8e-19 100.9 221 29.9
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 3.6e-19 100.5 267 31.8
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 6.2e-19 99.8 196 36.2
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 1.8e-18 98.2 318 28.9
C06p05550 Brassica napus HOM05D009532 ORTHO05D013511 5.2e-18 96.7 98 55.1
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.8e-18 96.3 200 32.5
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-17 95.5 133 36.8
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 1.5e-17 95.1 129 43.4
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-17 94.7 123 39.8
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 2.6e-17 94.4 246 28.0
BcaC05g26951 Brassica carinata HOM05D008825 ORTHO05D094164 2.6e-17 94.4 168 51.2
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 3.4e-17 94.0 233 31.3
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-17 94.0 123 39.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 4.4e-17 93.6 123 39.8
C09p42590 Brassica napus HOM05D008825 ORTHO05D017243 5.8e-17 93.2 50 76.0
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 5.8e-17 93.2 123 39.0
A08p07770 Brassica napus HOM05D009532 ORTHO05D013511 7.6e-17 92.8 98 53.1
C09p38200 Brassica napus HOM05D009532 ORTHO05D013511 7.6e-17 92.8 105 51.4
BolC5t32294H Brassica oleracea HOM05D009532 ORTHO05D013511 7.6e-17 92.8 98 54.1
BraA06t24764Z Brassica rapa HOM05D009532 ORTHO05D013511 7.6e-17 92.8 98 53.1
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.9e-17 92.4 152 38.8
BolC8t48188H Brassica oleracea HOM05D009532 ORTHO05D013511 1.3e-16 92.0 98 53.1
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 2.2e-16 91.3 123 39.0
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 2.9e-16 90.9 208 33.2
BcaC07g37797 Brassica carinata HOM05D009532 ORTHO05D013511 2.9e-16 90.9 146 40.4
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-16 90.5 123 39.0
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 3.8e-16 90.5 123 39.0
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-16 90.5 123 38.2
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.8e-16 90.5 123 39.0
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.9e-16 90.1 213 31.5
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 4.9e-16 90.1 233 30.5
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 4.9e-16 90.1 239 31.8
C06p04000 Brassica napus HOM05D009532 ORTHO05D013511 4.9e-16 90.1 119 46.2
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 6.4e-16 89.7 85 52.9
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-16 89.7 85 52.9
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 8.4e-16 89.4 227 32.2
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-15 89.0 123 39.0
BolC9t56660H Brassica oleracea HOM05D009532 ORTHO05D013511 1.1e-15 89.0 105 49.5
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 1.4e-15 88.6 214 36.0
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-15 88.2 217 30.9
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 2.4e-15 87.8 228 31.1
A08p06570 Brassica napus HOM05D008825 ORTHO05D017243 2.4e-15 87.8 50 76.0
BraA08t32673Z Brassica rapa HOM05D008825 ORTHO05D017243 2.4e-15 87.8 50 76.0
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 5.4e-15 86.7 115 44.3
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 5.4e-15 86.7 211 30.3
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.2e-15 85.9 227 29.1
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 1.6e-14 85.1 244 29.5
C08p25340 Brassica napus HOM05D009532 ORTHO05D013511 2.7e-14 84.3 93 48.4
BolC8t48343H Brassica oleracea HOM05D008316 ORTHO05D014956 2.7e-14 84.3 162 38.9
BolC8t50155H Brassica oleracea HOM05D009532 ORTHO05D013511 2.7e-14 84.3 93 48.4
A01p14830 Brassica napus HOM05D008825 ORTHO05D099744 3.5e-14 84.0 101 50.5
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 7.8e-14 82.8 131 39.7
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 1.7e-13 81.6 162 33.3
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 1.7e-13 81.6 138 39.9
C03p34630 Brassica napus HOM05D008825 ORTHO05D097937 1.7e-13 81.6 101 49.5
BolC3t17148H Brassica oleracea HOM05D014471 ORTHO05D017646 1.7e-13 81.6 104 46.2
BcaC08g45909 Brassica carinata HOM05D003554 ORTHO05D014926 2.3e-13 81.3 133 38.3
Aa31LG7G10730 Aethionema arabicum HOM05D003554 ORTHO05D008395 3.0e-13 80.9 141 34.8
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-13 80.9 100 42.0
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 3.9e-13 80.5 205 32.2
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 5.1e-13 80.1 201 32.8
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 5.1e-13 80.1 124 35.5
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.1e-13 80.1 238 27.7
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.6e-13 79.7 219 27.4
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-12 78.2 100 41.0
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 2.5e-12 77.8 134 39.6
C01p42550 Brassica napus HOM05D008316 ORTHO05D014956 3.3e-12 77.4 169 34.9
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 4.3e-12 77.0 159 32.7
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 5.6e-12 76.6 205 29.3
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 7.3e-12 76.3 120 35.8
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 7.3e-12 76.3 86 47.7
Aa31sc182G60 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.2e-11 75.5 132 36.4
BcaB05g23871 Brassica carinata HOM05D007984 ORTHO05D013027 1.6e-11 75.1 124 41.9
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-11 75.1 223 30.5
BcaB08g34926 Brassica carinata HOM05D007984 ORTHO05D013027 2.1e-11 74.7 135 38.5
BcaC03g13667 Brassica carinata HOM05D007984 ORTHO05D039917 2.1e-11 74.7 135 39.3
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-11 74.7 77 46.8
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 4.7e-11 73.6 155 32.9
BraA07t28444Z Brassica rapa HOM05D008825 ORTHO05D108605 4.7e-11 73.6 132 65.2
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 8.1e-11 72.8 76 51.3
BolC9t56607H Brassica oleracea HOM05D008825 ORTHO05D017243 8.1e-11 72.8 41 75.6
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 1.1e-10 72.4 224 32.1
BcaC05g26167 Brassica carinata HOM05D008825 ORTHO05D096329 1.1e-10 72.4 77 62.3
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.1e-10 72.4 269 26.8
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 2.4e-10 71.2 86 41.9
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 9.0e-10 69.3 68 51.5
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.0e-10 69.3 216 27.3
BcaB08g35951 Brassica carinata HOM05D035459 ORTHO05D092148 2.0e-09 68.2 52 69.2
BolC5t31525H Brassica oleracea HOM05D008825 ORTHO05D013031 2.6e-09 67.8 38 78.9
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.4e-09 67.0 209 27.8
BolC5t32274H Brassica oleracea HOM05D008825 ORTHO05D015484 5.8e-09 66.6 33 100.0
BcaC01g05681 Brassica carinata HOM05D009532 ORTHO05D013511 7.6e-09 66.2 98 44.9
C05p40690 Brassica napus HOM05D008825 ORTHO05D102159 9.9e-09 65.9 68 95.6
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.7e-08 65.1 95 36.8
THA.LOC109116460 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.7e-08 65.1 136 29.4
BraA03t14477Z Brassica rapa HOM05D008825 ORTHO05D015484 3.8e-08 63.9 53 69.8
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.4e-08 62.8 176 29.0
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.1e-07 62.4 192 27.6
BcaB05g21986 Brassica carinata HOM05D008316 ORTHO05D005130 1.1e-07 62.4 247 28.7
BcaB04g18306 Brassica carinata HOM05D007984 ORTHO05D013027 3.2e-07 60.8 150 34.7
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-07 59.7 103 32.0
C01p21660 Brassica napus HOM05D008825 ORTHO05D100998 1.6e-06 58.5 67 47.8
A08p06560 Brassica napus HOM05D008316 ORTHO05D021631 2.1e-06 58.2 88 44.3
C07p22550 Brassica napus HOM05D008316 ORTHO05D005130 2.1e-06 58.2 46 58.7
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 6.0e-06 56.6 120 32.5
BraA08t32671Z Brassica rapa HOM05D008316 ORTHO05D021631 7.8e-06 56.2 56 53.6


User provided reference genes

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