Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.5e-192 675.2 340 100.0
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 6.5e-180 634.0 361 91.4
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 6.5e-180 634.0 361 91.4
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-178 629.8 340 93.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 6.7e-177 624.0 340 92.6
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.4e-176 621.3 339 92.9
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.3e-172 609.8 362 88.4
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 5.0e-172 607.8 341 90.9
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.5e-171 605.5 335 91.3
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 3.6e-170 601.7 341 90.9
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.0e-169 598.6 341 89.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 2.2e-151 539.3 335 79.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.7e-151 538.5 339 78.5
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.6e-149 533.1 336 78.3
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 7.7e-149 530.8 339 77.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.0e-148 530.4 338 77.5
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.9e-148 528.9 339 78.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 8.6e-148 527.3 339 76.7
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.9e-147 526.2 325 78.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.5e-147 524.6 334 76.3
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 9.5e-147 523.9 335 75.8
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 2.1e-146 522.7 325 78.5
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.1e-146 522.7 343 77.0
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 3.6e-146 521.9 341 76.2
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.4e-145 520.0 338 76.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.3e-145 519.2 336 76.2
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.3e-145 519.2 381 69.8
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.5e-144 516.5 340 75.0
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-144 516.2 380 69.7
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.6e-144 515.8 339 76.1
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.4e-144 515.0 349 74.5
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 7.5e-144 514.2 319 80.3
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 7.5e-144 514.2 325 76.9
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.2e-143 512.7 340 75.9
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.8e-143 512.3 331 76.7
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.8e-143 512.3 338 75.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.7e-143 511.9 329 76.6
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 6.3e-143 511.1 284 90.5
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-142 510.0 349 73.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.4e-142 509.2 341 75.4
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.2e-142 508.8 323 77.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 4.1e-142 508.4 325 76.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 5.4e-142 508.1 322 78.6
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 7.0e-142 507.7 324 77.5
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.2e-141 506.9 325 76.6
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-141 506.1 349 73.4
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.7e-141 505.8 322 78.3
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.7e-141 505.8 327 77.1
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 4.5e-141 505.0 321 77.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.9e-140 501.9 338 73.7
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 8.6e-140 500.7 323 75.5
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.1e-139 500.4 322 76.7
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.5e-139 500.0 338 73.7
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.5e-139 499.2 323 75.9
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.3e-139 498.8 338 73.4
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.3e-139 498.4 338 74.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 4.3e-139 498.4 318 76.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 7.3e-139 497.7 323 76.2
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 7.3e-139 497.7 322 76.4
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 7.3e-139 497.7 325 76.6
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 9.5e-139 497.3 322 75.2
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.2e-138 496.9 321 76.3
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 8.0e-138 494.2 317 77.3
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.0e-137 493.8 326 74.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-137 493.4 372 68.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 8.9e-137 490.7 335 72.8
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.5e-136 490.0 322 74.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.0e-136 489.6 336 72.3
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.4e-136 488.4 318 74.5
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 5.8e-136 488.0 302 79.5
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 9.8e-136 487.3 323 75.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 3.7e-135 485.3 340 72.9
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.4e-134 483.4 337 71.8
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.4e-134 483.4 324 74.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 4.6e-133 478.4 310 76.5
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 8.6e-132 474.2 322 73.9
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.6e-130 469.9 301 77.7
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.6e-130 469.9 315 72.4
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-129 466.1 339 69.6
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.8e-129 464.5 375 65.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 7.5e-128 461.1 269 88.5
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.9e-127 459.1 300 77.0
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.2e-126 455.7 358 65.9
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 9.2e-126 454.1 307 73.6
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.5e-123 446.0 328 68.0
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.3e-123 445.3 285 78.6
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.6e-122 443.4 301 75.4
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.6e-122 442.2 329 68.7
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.1e-121 440.7 286 75.5
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 6.8e-121 438.0 372 62.9
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.5e-120 436.8 340 67.4
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 4.9e-119 431.8 336 67.0
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.7e-117 426.0 317 69.1
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.1e-115 420.6 335 67.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.6e-115 418.3 286 73.4
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.3e-115 417.9 374 61.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.6e-115 417.5 268 75.4
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.2e-111 406.4 284 70.4
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 2.2e-111 406.4 264 77.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 7.8e-109 397.9 307 65.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.7e-108 396.7 322 65.2
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 4.0e-105 385.6 293 65.9
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 5.3e-105 385.2 328 59.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 5.8e-104 381.7 284 68.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.3e-103 380.6 318 58.2
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 6.0e-101 371.7 338 54.4
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 6.0e-101 371.7 234 80.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.3e-100 370.5 325 57.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 8.7e-100 367.9 322 62.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.4e-94 350.5 283 66.1
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 4.6e-93 345.5 278 65.5
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.0e-92 344.4 317 54.3
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.9e-91 340.1 241 69.3
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.3e-84 316.6 235 66.8
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.8e-79 299.3 221 69.2
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.6e-72 276.6 364 41.8
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.9e-70 270.4 225 64.9
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 4.4e-51 206.1 147 75.5
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.3e-50 204.5 184 60.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.8e-50 203.4 328 36.9
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-47 194.1 144 69.4
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 5.2e-44 182.6 130 68.5
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 7.0e-41 172.2 108 72.2
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.9e-38 164.1 274 38.3
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.6e-29 133.3 96 68.8
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.7e-18 97.8 98 52.0
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 3.9e-15 86.7 63 65.1
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.2e-13 81.6 71 57.7
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.1e-12 78.6 83 55.4


User provided reference genes

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