Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42427 Brassica carinata HOM05D001826 ORTHO05D017545 1.8e-42 175.6 96 100.0
C08p53870 Brassica napus HOM05D001826 ORTHO05D004184 4.1e-39 164.5 88 100.0
BolC8t52901H Brassica oleracea HOM05D001826 ORTHO05D004184 2.0e-38 162.2 88 98.9
BraA09t42264Z Brassica rapa HOM05D001826 ORTHO05D004184 4.5e-38 161.0 88 98.9
Sp1g00490 Schrenkiella parvula HOM05D001826 ORTHO05D004184 4.9e-32 141.0 88 88.6
BcaB03g13616 Brassica carinata HOM05D001826 ORTHO05D004184 3.2e-31 138.3 88 87.5
A10p00230 Brassica napus HOM05D001826 ORTHO05D004184 3.2e-31 138.3 88 87.5
BraA10t42302Z Brassica rapa HOM05D001826 ORTHO05D004184 3.2e-31 138.3 88 87.5
C05p00260 Brassica napus HOM05D001826 ORTHO05D004184 4.1e-31 137.9 88 86.4
BolC5t28815H Brassica oleracea HOM05D001826 ORTHO05D004184 4.1e-31 137.9 88 86.4
Carub.0001s0042 Capsella rubella HOM05D001826 ORTHO05D004184 3.5e-30 134.8 88 87.5
Thhalv10006595m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 6.0e-30 134.0 83 88.0
Thhalv10006607m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 6.0e-30 134.0 83 88.0
BcaB03g13615 Brassica carinata HOM05D001826 ORTHO05D004184 3.0e-29 131.7 88 84.1
A10p00260 Brassica napus HOM05D001826 ORTHO05D004184 5.0e-29 131.0 88 84.1
C05p00270 Brassica napus HOM05D001826 ORTHO05D004184 5.0e-29 131.0 88 84.1
BolC5t28817H Brassica oleracea HOM05D001826 ORTHO05D004184 5.0e-29 131.0 88 84.1
AL1G10550 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 8.6e-29 130.2 88 84.1
CARHR000530 Cardamine hirsuta HOM05D001826 ORTHO05D004184 1.5e-28 129.4 86 83.7
AT1G01790 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 2.5e-28 128.6 88 83.0
Aa31LG1G11160 Aethionema arabicum HOM05D001826 ORTHO05D004184 5.6e-28 127.5 82 84.1
BraA09t42181Z Brassica rapa HOM05D001826 ORTHO05D017545 2.8e-27 125.2 80 86.2
Sed0024442 Sechium edule HOM05D001826 ORTHO05D004184 6.2e-27 124.0 82 82.9
TAR374G0698 Trochodendron aralioides HOM05D001826 ORTHO05D017545 1.1e-26 123.2 82 81.7
ClCG05G001700 Citrullus lanatus HOM05D001826 ORTHO05D004184 2.3e-26 122.1 82 81.7
Potri.014G080800 Populus trichocarpa HOM05D001826 ORTHO05D004184 2.3e-26 122.1 82 81.7
MELO3C006129.2 Cucumis melo HOM05D001826 ORTHO05D004184 3.1e-26 121.7 82 81.7
CsaV3_3G009090 Cucumis sativus L. HOM05D001826 ORTHO05D004184 3.1e-26 121.7 82 81.7
Duzib133G0016 Durio zibethinus HOM05D001826 ORTHO05D004184 8.9e-26 120.2 82 80.5
Nn6g33530 Nelumbo nucifera HOM05D001826 ORTHO05D004184 8.9e-26 120.2 82 79.3
CSS0017008 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.2e-25 119.8 82 80.5
CSS0033058 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.2e-25 119.8 82 80.5
AUR62033325 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.2e-25 119.8 82 78.0
AUR62033334 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.2e-25 119.8 82 78.0
AUR62004319 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.5e-25 119.4 82 78.0
Sabra14G0058600 Salix brachista HOM05D001826 ORTHO05D004184 1.5e-25 119.4 82 80.5
Sp1g00500 Schrenkiella parvula HOM05D001826 ORTHO05D004184 2.0e-25 119.0 88 80.7
Duzib138G1216 Durio zibethinus HOM05D001826 ORTHO05D004184 2.6e-25 118.6 82 78.0
Thecc.01G363300 Theobroma cacao HOM05D001826 ORTHO05D004184 2.6e-25 118.6 82 78.0
Hma1.2p1_0001F.1_g001660 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 3.4e-25 118.2 82 78.0
MD07G1141400 Malus domestica HOM05D001826 ORTHO05D004184 3.4e-25 118.2 82 78.0
Actinidia33431 Actinidia chinensis HOM05D001826 ORTHO05D004184 4.4e-25 117.9 82 78.0
arahy.Tifrunner.gnm1.ann1.42EX8Y Arachis hypogaea HOM05D001826 ORTHO05D004184 4.4e-25 117.9 83 75.9
Ciclev10018563m.g Citrus clementina HOM05D001826 ORTHO05D004184 5.8e-25 117.5 82 78.0
QL08p049532 Quercus lobata HOM05D001826 ORTHO05D004184 5.8e-25 117.5 82 76.8
Solyc01g094290.3 Solanum lycopersicum HOM05D001826 ORTHO05D004184 5.8e-25 117.5 88 77.3
Sopen01g038090 Solanum pennellii HOM05D001826 ORTHO05D004184 5.8e-25 117.5 88 77.3
Oeu014675.3 Olea europaea HOM05D001826 ORTHO05D004184 7.5e-25 117.1 82 78.0
SalBow5G0163 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.5e-25 117.1 82 78.0
SalBow5G2532 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.5e-25 117.1 82 78.0
GSVIVG01026846001 Vitis vinifera HOM05D001826 ORTHO05D004184 7.5e-25 117.1 82 79.3
Lsat_1_v5_gn_3_136621 Lactuca sativa HOM05D001826 ORTHO05D004184 9.8e-25 116.7 82 79.3
Hund27301 Selenicereus undatus HOM05D001826 ORTHO05D004184 9.8e-25 116.7 82 75.6
Gohir.A12G105000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.3e-24 116.3 80 78.8
Potri.002G157200 Populus trichocarpa HOM05D001826 ORTHO05D004184 1.3e-24 116.3 82 78.0
Hund16940 Selenicereus undatus HOM05D001826 ORTHO05D004184 1.3e-24 116.3 88 75.0
TWI23G0863 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 1.3e-24 116.3 82 76.8
Aa31LG5G380 Aethionema arabicum HOM05D001826 ORTHO05D004184 1.7e-24 115.9 83 77.1
CiPaw.01G057800 Carya illinoinensis HOM05D001826 ORTHO05D004184 1.7e-24 115.9 82 76.8
Lalb_Chr10g0097211 Lupinus albus HOM05D001826 ORTHO05D004184 1.7e-24 115.9 82 76.8
PGR042G0308 Punica granatum HOM05D001826 ORTHO05D004184 1.7e-24 115.9 82 75.6
arahy.Tifrunner.gnm1.ann1.253UZ6 Arachis hypogaea HOM05D001826 ORTHO05D004184 2.2e-24 115.5 83 74.7
COL.COLO4_12675 Corchorus olitorius HOM05D001826 ORTHO05D004184 2.2e-24 115.5 88 73.9
Prupe.2G162700 Prunus persica HOM05D001826 ORTHO05D004184 2.2e-24 115.5 82 76.8
PGSC0003DMG400000153 Solanum tuberosum HOM05D001826 ORTHO05D004184 2.2e-24 115.5 82 78.0
Actinidia12714 Actinidia chinensis HOM05D001826 ORTHO05D004184 2.9e-24 115.2 82 76.8
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 2.9e-24 115.2 88 76.1
Dinv32449 Davidia involucrata HOM05D001826 ORTHO05D004184 2.9e-24 115.2 88 76.1
Manes.05G037400 Manihot esculenta HOM05D001826 ORTHO05D004184 2.9e-24 115.2 82 76.8
TAR375G0082 Trochodendron aralioides HOM05D001826 ORTHO05D004184 2.9e-24 115.2 82 76.8
vmacro13307 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 2.9e-24 115.2 82 75.6
Carub.0006s3656 Capsella rubella HOM05D001826 ORTHO05D004184 3.7e-24 114.8 84 76.2
MD01G1053700 Malus domestica HOM05D001826 ORTHO05D004184 3.7e-24 114.8 82 75.6
PSO063G0747 Papaver somniferum HOM05D001826 ORTHO05D004184 3.7e-24 114.8 88 76.1
PSO782G0182 Papaver somniferum HOM05D001826 ORTHO05D004184 3.7e-24 114.8 88 76.1
Rhsim07G0018000 Rhododendron simsii HOM05D001826 ORTHO05D004184 3.7e-24 114.8 82 75.6
Hma1.2p1_0033F.1_g020380 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 4.9e-24 114.4 82 76.8
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 4.9e-24 114.4 84 77.4
ATR0680G345 Amborella trichopoda HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 79.3
AL6G52810 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 75.6
HanXRQChr03g0093471 Helianthus annuus HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 75.6
Lj7A516T61 Lonicera japonica HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 76.8
TWI59G0720 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 75.6
TWI59G1454 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 6.4e-24 114.0 82 75.6
arahy.Tifrunner.gnm1.ann1.8F4Z70 Arachis hypogaea HOM05D001826 ORTHO05D004184 8.3e-24 113.6 82 75.6
arahy.Tifrunner.gnm1.ann1.SLD8LW Arachis hypogaea HOM05D001826 ORTHO05D004184 8.3e-24 113.6 82 75.6
Migut.B01724 Erythranthe guttata HOM05D001826 ORTHO05D004184 8.3e-24 113.6 83 78.3
FvH4_7g13660 Fragaria vesca HOM05D001826 ORTHO05D004184 8.3e-24 113.6 82 74.4
Gohir.D12G108900 Gossypium hirsutum HOM05D001826 ORTHO05D004184 8.3e-24 113.6 80 77.5
Gorai.008G118000 Gossypium raimondii HOM05D001826 ORTHO05D004184 8.3e-24 113.6 80 77.5
DCAR_015945 Daucus carota HOM05D001826 ORTHO05D004184 1.1e-23 113.2 85 75.3
Eucgr.E00180 Eucalyptus grandis HOM05D001826 ORTHO05D004184 1.1e-23 113.2 82 75.6
FAN03G3317 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.1e-23 113.2 82 74.4
Lj1g0018622 Lotus japonicus HOM05D001826 ORTHO05D004184 1.4e-23 112.8 82 75.6
Lalb_Chr19g0127041 Lupinus albus HOM05D001826 ORTHO05D004184 1.4e-23 112.8 82 73.2
Nitab4.5_0001620g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 1.4e-23 112.8 82 76.8
Nitab4.5_0003111g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 1.4e-23 112.8 82 76.8
Sed0005198 Sechium edule HOM05D001826 ORTHO05D004184 1.4e-23 112.8 82 75.6
AT4G00630 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 74.4
MSTRG.20812 Avicennia marina HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 76.8
CSS0021518 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 75.6
Cpa.g.sc18.224 Carica papaya HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 79.3
DCAR_008601 Daucus carota HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 75.6
Peaxi162Scf00397g00111 Petunia axillaris HOM05D001826 ORTHO05D004184 1.9e-23 112.5 82 76.8
Aqoxy5G04023 Aquilegia oxysepala HOM05D001826 ORTHO05D004184 2.4e-23 112.1 82 75.6
ECA240G3725 Erigeron canadensis HOM05D001826 ORTHO05D004184 2.4e-23 112.1 82 75.6
Haze_15465 Corylus avellana HOM05D001826 ORTHO05D004184 3.2e-23 111.7 77 80.5
Sabra02G0124800 Salix brachista HOM05D001826 ORTHO05D004184 3.2e-23 111.7 82 74.4
THA.LOC104801451 Tarenaya hassleriana HOM05D001826 ORTHO05D004184 4.1e-23 111.3 80 78.8
Ah.05g176450 Amaranthus hybridus HOM05D001826 ORTHO05D004184 5.4e-23 110.9 82 73.2
HanXRQChr13g0426341 Helianthus annuus HOM05D001826 ORTHO05D004184 5.4e-23 110.9 82 75.6
HPP92_020862 Vanilla planifolia HOM05D001826 ORTHO05D004184 5.4e-23 110.9 88 72.7
Glyma.18G230100 Glycine max HOM05D001826 ORTHO05D004184 7.1e-23 110.5 82 73.2
RcHm_v2.0_Chr1g0353741 Rosa chinensis HOM05D001826 ORTHO05D004184 9.2e-23 110.2 82 74.4
vmacro20955 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 9.2e-23 110.2 88 72.7
FAN01G1586 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.2e-22 109.8 82 70.7
Glyma.09G262000 Glycine max HOM05D001826 ORTHO05D004184 1.6e-22 109.4 82 73.2
Lj3g0020333 Lotus japonicus HOM05D001826 ORTHO05D004184 1.6e-22 109.4 82 74.4
Zm00001eb433980 Zea mays HOM05D001826 ORTHO05D004184 1.6e-22 109.4 82 75.6
Medtr8g031550 Medicago truncatula HOM05D001826 ORTHO05D004184 2.1e-22 109.0 82 73.2
Ca_23666_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 2.7e-22 108.6 82 73.2
DCAR_006915 Daucus carota HOM05D001826 ORTHO05D004184 2.7e-22 108.6 82 73.2
CANSAT56G1923 Cannabis sativa HOM05D001826 ORTHO05D004184 3.5e-22 108.2 82 69.5
SalBow3G1103 Salvia bowleyana HOM05D001826 ORTHO05D004184 3.5e-22 108.2 82 76.8
EL10Ac1g00529 Beta vulgaris HOM05D001826 ORTHO05D004184 4.6e-22 107.8 82 73.2
CDE06G1001 Ceratophyllum demersum HOM05D001826 ORTHO05D004184 4.6e-22 107.8 82 76.8
Ca_07891_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 4.6e-22 107.8 88 68.2
CiPaw.02G028500 Carya illinoinensis HOM05D001826 ORTHO05D004184 7.8e-22 107.1 83 73.5
Glyma.03G014000 Glycine max HOM05D001826 ORTHO05D004184 7.8e-22 107.1 81 71.6
TPR.G4440 Trifolium pratense HOM05D001826 ORTHO05D004184 7.8e-22 107.1 82 72.0
Actinidia20930 Actinidia chinensis HOM05D001826 ORTHO05D004184 1.0e-21 106.7 82 73.2
Phvul.008G067800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.0e-21 106.7 82 70.7
Atru.chr5.450 Acer truncatum HOM05D001826 ORTHO05D004184 1.3e-21 106.3 66 87.9
VMungo1383G3314 Vigna mungo HOM05D001826 ORTHO05D004184 1.3e-21 106.3 84 67.9
Cc02_g37680 Coffea canephora HOM05D001826 ORTHO05D004184 1.7e-21 105.9 77 74.0
HanXRQChr06g0169881 Helianthus annuus HOM05D001826 ORTHO05D004184 1.7e-21 105.9 82 72.0
Medtr7g076700 Medicago truncatula HOM05D001826 ORTHO05D004184 1.7e-21 105.9 88 68.2
HanXRQChr04g0121631 Helianthus annuus HOM05D001826 ORTHO05D004184 2.3e-21 105.5 82 70.7
Psat4g153760 Pisum sativum HOM05D001826 ORTHO05D004184 3.9e-21 104.8 74 77.0
SGA_v2.0_scaffold277G46674 Striga asiatica HOM05D001826 ORTHO05D004184 3.9e-21 104.8 76 75.0
Lsat_1_v5_gn_7_5161 Lactuca sativa HOM05D001826 ORTHO05D004184 5.1e-21 104.4 90 70.0
TPR.G37729 Trifolium pratense HOM05D001826 ORTHO05D004184 6.6e-21 104.0 88 65.9
Psat3g110880 Pisum sativum HOM05D001826 ORTHO05D004184 8.6e-21 103.6 88 65.9
ECA236G3271 Erigeron canadensis HOM05D001826 ORTHO05D004184 1.1e-20 103.2 82 69.5
MSTRG.4866 Avicennia marina HOM05D001826 ORTHO05D004184 1.9e-20 102.4 82 68.3
Glyma.07G073700 Glycine max HOM05D001826 ORTHO05D004184 2.5e-20 102.1 81 67.9
DCAR_025143 Daucus carota HOM05D001826 ORTHO05D004184 3.3e-20 101.7 82 68.3
SMO331G0018 Selaginella moellendorffii HOM05D001826 ORTHO05D004184 9.5e-20 100.1 76 68.4
Lj9C580G11 Lonicera japonica HOM05D001826 ORTHO05D004184 4.7e-19 97.8 82 67.1
VMungo0331G1572 Vigna mungo HOM05D001826 ORTHO05D004184 5.2e-18 94.4 74 71.6
Pp3c7_22160 Physcomitrium patens HOM05D001826 ORTHO05D004184 6.8e-18 94.0 66 78.8
Mapoly0055s0072 Marchantia polymorpha HOM05D001826 ORTHO05D004184 4.4e-17 91.3 66 74.2
Pp3c11_6640 Physcomitrium patens HOM05D001826 ORTHO05D004184 7.6e-17 90.5 76 65.8
Phvul.010G095600 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.3e-16 89.7 71 73.2
Pp3c11_22410 Physcomitrium patens HOM05D001826 ORTHO05D004184 3.7e-16 88.2 59 78.0
Phvul.010G095800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 4.9e-16 87.8 71 71.8
Gohir.A08G130000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 6.4e-16 87.4 76 63.2
Gohir.D08G151300 Gossypium hirsutum HOM05D001826 ORTHO05D004184 6.4e-16 87.4 76 63.2
Gorai.004G157200 Gossypium raimondii HOM05D001826 ORTHO05D004184 6.4e-16 87.4 76 63.2
unitig_8.g3808 Utricularia gibba HOM05D001826 ORTHO05D004184 2.4e-15 85.5 126 50.0
Nn1g01431 Nelumbo nucifera HOM05D001826 ORTHO05D017545 3.0e-13 78.6 58 69.0
CSS0020146 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 7.3e-12 73.9 62 64.5
Cre04.g220200 Chlamydomonas reinhardtii HOM05D001826 ORTHO05D004184 5.2e-10 67.8 61 59.0
vmacro13309 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.2e-09 66.6 45 80.0
MCO01G795 Micromonas commoda HOM05D001826 ORTHO05D004184 1.4e-07 59.7 58 51.7
CBR_g18697 Chara braunii HOM05D001826 ORTHO05D004184 1.9e-07 59.3 67 49.3
CSS0050323 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 5.4e-07 57.8 90 41.1


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