Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42387 Brassica carinata HOM05D009037 ORTHO05D011187 7.5e-73 277.7 217 100.0
C08p53330 Brassica napus HOM05D009037 ORTHO05D011187 7.5e-73 277.7 217 100.0
BolC8t52848H Brassica oleracea HOM05D009037 ORTHO05D011187 2.7e-70 269.2 217 98.2
A09p68780 Brassica napus HOM05D009037 ORTHO05D011187 1.7e-69 266.5 217 97.7
BraA09t42216Z Brassica rapa HOM05D009037 ORTHO05D011187 1.7e-69 266.5 217 97.7
BcaC07g42319 Brassica carinata HOM05D009037 ORTHO05D011187 1.2e-62 243.8 217 89.4
BcaNung07263 Brassica carinata HOM05D009037 ORTHO05D011187 1.8e-58 229.9 210 88.6
CARHR001700 Cardamine hirsuta HOM05D009037 ORTHO05D011187 8.1e-35 151.4 231 53.2
Thhalv10009390m.g Eutrema salsugineum HOM05D009037 ORTHO05D011187 3.4e-33 146.0 239 64.4
BcaB03g15786 Brassica carinata HOM05D009037 ORTHO05D011187 1.1e-31 141.0 234 70.1
Carub.0001s0143 Capsella rubella HOM05D009037 ORTHO05D011187 1.8e-29 133.7 239 66.5
A10p01150 Brassica napus HOM05D009037 ORTHO05D011187 1.5e-28 130.6 229 52.4
BraA10t42394Z Brassica rapa HOM05D009037 ORTHO05D011187 1.5e-28 130.6 229 66.8
AT1G02380 Arabidopsis thaliana HOM05D009037 ORTHO05D011187 2.5e-28 129.8 239 56.1
Sp1g01460 Schrenkiella parvula HOM05D009037 ORTHO05D011187 1.6e-27 127.1 240 56.7
C05p01180 Brassica napus HOM05D009037 ORTHO05D011187 2.8e-27 126.3 226 67.3
BolC5t28900H Brassica oleracea HOM05D009037 ORTHO05D011187 3.7e-27 125.9 226 67.3
BcaC05g24621 Brassica carinata HOM05D009037 ORTHO05D011187 2.6e-25 119.8 229 65.5
BcaC05g24619 Brassica carinata HOM05D009037 ORTHO05D011187 2.7e-22 109.8 257 58.4
AL1G11730 Arabidopsis lyrata HOM05D009037 ORTHO05D011187 8.7e-21 104.8 239 51.5
THA.LOC104825933 Tarenaya hassleriana HOM05D009037 ORTHO05D011187 1.0e-16 91.3 243 46.9
Sp6g01840 Schrenkiella parvula HOM05D009037 ORTHO05D011187 1.2e-14 84.3 249 54.6
Thhalv10028934m.g Eutrema salsugineum HOM05D009037 ORTHO05D011187 5.1e-13 79.0 243 54.3
Aa31LG5G1610 Aethionema arabicum HOM05D009037 ORTHO05D011187 8.8e-13 78.2 246 42.7
Carub.0006s3527 Capsella rubella HOM05D009037 ORTHO05D011187 5.7e-12 75.5 248 46.4
AT4G01960 Arabidopsis thaliana HOM05D009037 ORTHO05D011187 8.2e-11 71.6 248 44.4
THA.LOC104801307 Tarenaya hassleriana HOM05D009037 ORTHO05D011187 1.1e-10 71.2 238 44.1
A09p01430 Brassica napus HOM05D009037 ORTHO05D011187 9.1e-10 68.2 251 39.8
BraA09t35806Z Brassica rapa HOM05D009037 ORTHO05D011187 9.1e-10 68.2 251 39.8
AL6G51330 Arabidopsis lyrata HOM05D009037 ORTHO05D011187 1.5e-09 67.4 248 43.5
CARHR249720 Cardamine hirsuta HOM05D009037 ORTHO05D011187 2.0e-09 67.0 250 43.2
BcaC04g24056 Brassica carinata HOM05D009037 ORTHO05D011187 2.6e-09 66.6 251 39.4
BolC9t53088H Brassica oleracea HOM05D009037 ORTHO05D011187 4.5e-09 65.9 249 39.4
C09p01550 Brassica napus HOM05D009037 ORTHO05D011187 7.7e-09 65.1 251 39.0
BcaB01g02095 Brassica carinata HOM05D009037 ORTHO05D011187 2.5e-07 60.1 250 45.6


User provided reference genes

Program Settings