Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42314 Brassica carinata HOM05D010308 ORTHO05D012783 4.3e-48 194.9 146 100.0
C08p53280 Brassica napus HOM05D010308 ORTHO05D012783 9.3e-43 177.2 148 69.6
A09p68710 Brassica napus HOM05D010308 ORTHO05D012783 6.0e-42 174.5 148 68.9
BraA09t42210Z Brassica rapa HOM05D010308 ORTHO05D012783 1.1e-40 170.2 150 70.0
BcaC07g42393 Brassica carinata HOM05D010308 ORTHO05D012783 2.5e-40 169.1 148 67.6
BolC8t52843H Brassica oleracea HOM05D010308 ORTHO05D012783 2.5e-40 169.1 122 76.2
BcaC07g42313 Brassica carinata HOM05D010308 ORTHO05D012783 6.1e-34 147.9 71 100.0
Thhalv10009031m.g Eutrema salsugineum HOM05D010308 ORTHO05D012783 3.8e-28 128.6 149 63.8
C05p01240 Brassica napus HOM05D010308 ORTHO05D012783 9.4e-27 124.0 148 62.8
BraA10t42402Z Brassica rapa HOM05D010308 ORTHO05D012783 1.5e-24 116.7 150 62.0
Sp1g01520 Schrenkiella parvula HOM05D010308 ORTHO05D012783 7.4e-24 114.4 151 60.9
BcaC05g24624 Brassica carinata HOM05D010308 ORTHO05D012783 1.4e-22 110.2 155 58.1
BolC5t28907H Brassica oleracea HOM05D010308 ORTHO05D012783 1.4e-22 110.2 155 58.1
CARHR001770 Cardamine hirsuta HOM05D010308 ORTHO05D012783 2.4e-22 109.4 123 62.6
Carub.0001s0152 Capsella rubella HOM05D010308 ORTHO05D012783 6.5e-20 101.3 146 46.6
A10p01240 Brassica napus HOM05D010308 ORTHO05D012783 8.5e-20 100.9 75 66.7
BcaB03g15778 Brassica carinata HOM05D010308 ORTHO05D012783 5.7e-16 88.2 103 68.0
BcaNung06865 Brassica carinata HOM05D010308 ORTHO05D012783 5.7e-16 88.2 103 68.0
BcaC05g24625 Brassica carinata HOM05D010308 ORTHO05D004467 7.0e-14 81.3 77 61.0
AT1G02450 Arabidopsis thaliana HOM05D010308 ORTHO05D012783 2.5e-11 72.8 74 54.1
Aa31LG5G1460 Aethionema arabicum HOM05D012270 ORTHO05D014329 1.0e-09 67.4 105 51.4
Thhalv10029175m.g Eutrema salsugineum HOM05D012270 ORTHO05D014329 6.7e-09 64.7 107 51.4
A03p31420 Brassica napus HOM05D012270 ORTHO05D014329 8.8e-09 64.3 104 45.2
BraA03t12323Z Brassica rapa HOM05D012270 ORTHO05D014329 8.8e-09 64.3 104 45.2
AL1G11790 Arabidopsis lyrata HOM05D010308 ORTHO05D012783 2.8e-07 59.3 63 54.0
C03p38330 Brassica napus HOM05D012270 ORTHO05D014329 1.1e-06 57.4 73 42.5
BcaC01g06794 Brassica carinata HOM05D012270 ORTHO05D014329 1.4e-06 57.0 73 41.1
BcaC01g06796 Brassica carinata HOM05D012270 ORTHO05D014329 1.4e-06 57.0 73 41.1
BolC3t16114H Brassica oleracea HOM05D012270 ORTHO05D014329 1.4e-06 57.0 73 41.1
Sp6g01750 Schrenkiella parvula HOM05D012270 ORTHO05D014329 1.8e-06 56.6 60 50.0


User provided reference genes

Program Settings