Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41866 Brassica carinata HOM05D000760 ORTHO05D024010 1.4e-70 269.6 145 100.0
C08p49330 Brassica napus HOM05D000760 ORTHO05D024010 1.1e-64 250.0 145 95.9
A09p65360 Brassica napus HOM05D000760 ORTHO05D024010 2.9e-52 208.8 162 76.5
BraA09t41882Z Brassica rapa HOM05D000760 ORTHO05D024010 2.9e-52 208.8 162 76.5
BolC8t52470H Brassica oleracea HOM05D000760 ORTHO05D024010 2.4e-51 205.7 165 75.8
Carub.0001s0893 Capsella rubella HOM05D000760 ORTHO05D000618 2.1e-18 96.3 214 38.8
AT1G09580 Arabidopsis thaliana HOM05D000760 ORTHO05D000618 1.3e-17 93.6 214 38.3
Thhalv10008686m.g Eutrema salsugineum HOM05D000760 ORTHO05D000618 4.3e-16 88.6 214 37.9
CARHR009560 Cardamine hirsuta HOM05D000760 ORTHO05D000618 2.4e-14 82.8 214 36.9
AL1G20110 Arabidopsis lyrata HOM05D000760 ORTHO05D000618 1.2e-13 80.5 214 36.4
Sp1g08190 Schrenkiella parvula HOM05D000760 ORTHO05D000618 2.0e-13 79.7 211 37.4
BcaB03g13304 Brassica carinata HOM05D000760 ORTHO05D000618 3.4e-13 79.0 214 37.4
BraA08t35359Z Brassica rapa HOM05D000760 ORTHO05D000618 5.9e-13 78.2 214 36.4
A08p34470 Brassica napus HOM05D000760 ORTHO05D000618 1.3e-12 77.0 214 36.4
BolC8t48932H Brassica oleracea HOM05D000760 ORTHO05D000618 1.3e-12 77.0 214 36.4
C08p13020 Brassica napus HOM05D000760 ORTHO05D000618 2.2e-12 76.3 214 36.0
BcaC07g38520 Brassica carinata HOM05D000760 ORTHO05D000618 2.9e-12 75.9 214 36.0
C05p07630 Brassica napus HOM05D000760 ORTHO05D000618 6.5e-12 74.7 213 36.6
BolC5t29515H Brassica oleracea HOM05D000760 ORTHO05D000618 6.5e-12 74.7 213 36.6
BraA06t23839Z Brassica rapa HOM05D000760 ORTHO05D000618 8.5e-12 74.3 213 36.6
A06p06290 Brassica napus HOM05D000760 ORTHO05D000618 1.1e-11 73.9 213 36.6
THA.LOC104823708 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 2.5e-11 72.8 218 33.5
Aa31LG1G5440 Aethionema arabicum HOM05D000760 ORTHO05D000618 2.1e-10 69.7 218 33.0
BcaB07g31146 Brassica carinata HOM05D000760 ORTHO05D000618 2.3e-09 66.2 214 31.8
A01p27940 Brassica napus HOM05D000760 ORTHO05D000618 3.9e-09 65.5 214 31.3
BraA01t02931Z Brassica rapa HOM05D000760 ORTHO05D000618 3.9e-09 65.5 214 31.3
BraA09t37506Z Brassica rapa HOM05D000760 ORTHO05D000618 3.9e-09 65.5 205 32.2
BcaC09g49532 Brassica carinata HOM05D000760 ORTHO05D000618 5.1e-09 65.1 214 31.3
BolC1t03510H Brassica oleracea HOM05D000760 ORTHO05D000618 5.1e-09 65.1 214 31.3
A09p18850 Brassica napus HOM05D000760 ORTHO05D000618 8.8e-09 64.3 205 32.2
Sp2g05840 Schrenkiella parvula HOM05D000760 ORTHO05D000618 1.1e-08 63.9 214 31.8
BcaB04g20170 Brassica carinata HOM05D000760 ORTHO05D000618 4.3e-08 62.0 214 31.3
Thhalv10023686m.g Eutrema salsugineum HOM05D000760 ORTHO05D000618 4.3e-08 62.0 206 32.0
BcaC04g22086 Brassica carinata HOM05D000760 ORTHO05D000618 5.7e-08 61.6 205 31.2
C09p23630 Brassica napus HOM05D000760 ORTHO05D000618 5.7e-08 61.6 205 31.2
BolC9t55283H Brassica oleracea HOM05D000760 ORTHO05D000618 5.7e-08 61.6 205 31.2
Actinidia26145 Actinidia chinensis HOM05D000760 ORTHO05D000618 7.4e-08 61.2 213 30.5
Actinidia00208 Actinidia chinensis HOM05D000760 ORTHO05D000618 2.8e-07 59.3 213 29.6
THA.LOC104816834 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 2.8e-07 59.3 84 47.6
BcaB04g20171 Brassica carinata HOM05D000760 ORTHO05D000618 1.1e-06 57.4 210 30.0
Carub.0002s0701 Capsella rubella HOM05D000760 ORTHO05D000618 1.4e-06 57.0 214 29.0
Peaxi162Scf00011g00355 Petunia axillaris HOM05D000760 ORTHO05D000618 4.1e-06 55.5 201 26.9
CARHR054650 Cardamine hirsuta HOM05D000760 ORTHO05D000618 5.3e-06 55.1 205 29.3
Cpa.g.sc113.62 Carica papaya HOM05D000760 ORTHO05D000618 6.9e-06 54.7 211 29.4
THA.LOC104820379 Tarenaya hassleriana HOM05D000760 ORTHO05D000618 9.1e-06 54.3 84 45.2


User provided reference genes

Program Settings