Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41774 Brassica carinata HOM05D008530 ORTHO05D027544 3.6e-94 348.2 173 100.0
C08p48150 Brassica napus HOM05D008530 ORTHO05D027544 1.3e-75 286.6 164 88.4
BcaB08g37402 Brassica carinata HOM05D008530 ORTHO05D027544 2.2e-75 285.8 202 75.2
BcaB08g37401 Brassica carinata HOM05D008530 ORTHO05D011436 6.3e-46 188.0 113 87.6
BolC8t52334H Brassica oleracea HOM05D008530 ORTHO05D011436 2.0e-39 166.4 218 51.4
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 4.8e-38 161.8 222 49.1
C08p46990 Brassica napus HOM05D008530 ORTHO05D011436 8.2e-38 161.0 216 50.0
BolC8t52236H Brassica oleracea HOM05D008530 ORTHO05D011436 8.2e-38 161.0 216 50.0
BraA09t41789Z Brassica rapa HOM05D008530 ORTHO05D011436 2.4e-37 159.5 211 50.2
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 5.0e-35 151.8 207 48.8
BcaB08g37411 Brassica carinata HOM05D008530 ORTHO05D011436 1.8e-32 143.3 171 53.8
BraA09t41777Z Brassica rapa HOM05D008530 ORTHO05D011436 3.3e-31 139.0 222 46.4
C07p01980 Brassica napus HOM05D008530 ORTHO05D040054 2.9e-27 125.9 231 42.4
BraA01t00697Z Brassica rapa HOM05D008530 ORTHO05D020138 2.3e-24 116.3 187 47.1
BolC1t00892H Brassica oleracea HOM05D008530 ORTHO05D020138 2.2e-22 109.8 204 42.2
A03p05230 Brassica napus HOM05D008530 ORTHO05D020138 4.8e-22 108.6 182 44.5
BcaC09g51786 Brassica carinata HOM05D002665 ORTHO05D020138 6.3e-22 108.2 179 43.0
A09p63050 Brassica napus HOM05D008530 ORTHO05D011436 6.3e-22 108.2 213 38.5
C01p09020 Brassica napus HOM05D008530 ORTHO05D020138 6.3e-22 108.2 179 43.0
BraA09t41658Z Brassica rapa HOM05D008530 ORTHO05D011436 6.3e-22 108.2 213 38.5
A05p36570 Brassica napus HOM05D008530 ORTHO05D020138 1.4e-21 107.1 206 41.7
BraA09t41662Z Brassica rapa HOM05D008530 ORTHO05D011436 1.2e-20 104.0 213 38.0
BolC8t52203H Brassica oleracea HOM05D008530 ORTHO05D011436 3.5e-20 102.4 222 36.9
A01p07520 Brassica napus HOM05D008530 ORTHO05D020138 2.2e-19 99.8 233 37.8
A09p63000 Brassica napus HOM05D008530 ORTHO05D011436 3.8e-19 99.0 197 40.1
BolC8t52199H Brassica oleracea HOM05D008530 ORTHO05D011436 8.5e-19 97.8 202 38.1
A09p63010 Brassica napus HOM05D008530 ORTHO05D011436 1.9e-18 96.7 107 54.2
BcaB06g25599 Brassica carinata HOM05D008530 ORTHO05D011436 5.5e-18 95.1 218 36.7
BcaC07g41644 Brassica carinata HOM05D008530 ORTHO05D011436 2.7e-17 92.8 207 38.2
BcaC07g41650 Brassica carinata HOM05D008530 ORTHO05D011436 6.1e-17 91.7 203 37.4
C08p46510 Brassica napus HOM05D008530 ORTHO05D011436 6.1e-17 91.7 203 37.4
BolC8t52194H Brassica oleracea HOM05D008530 ORTHO05D011436 6.1e-17 91.7 213 37.1
BcaC07g41646 Brassica carinata HOM05D008530 ORTHO05D011436 2.3e-16 89.7 213 36.6
C08p46470 Brassica napus HOM05D008530 ORTHO05D011436 2.3e-16 89.7 213 36.6
BolC8t52195H Brassica oleracea HOM05D008530 ORTHO05D032716 3.0e-16 89.4 98 58.2
BraA09t41666Z Brassica rapa HOM05D008530 ORTHO05D011436 8.8e-16 87.8 227 34.8
A09p63120 Brassica napus HOM05D008530 ORTHO05D011436 1.2e-15 87.4 227 34.8
C08p46590 Brassica napus HOM05D008530 ORTHO05D011436 3.4e-15 85.9 222 34.7
BcaB08g34294 Brassica carinata HOM05D008530 ORTHO05D011436 2.8e-14 82.8 178 33.7
BcaB08g34293 Brassica carinata HOM05D008530 ORTHO05D014035 3.7e-14 82.4 131 42.0
BcaB06g28774 Brassica carinata HOM05D008530 ORTHO05D007797 4.1e-13 79.0 62 66.1
A09p63090 Brassica napus HOM05D008530 ORTHO05D011436 3.8e-11 72.4 226 30.5
Thhalv10014517m.g Eutrema salsugineum HOM05D005207 ORTHO05D011436 6.5e-11 71.6 106 47.2
BcaC07g41583 Brassica carinata HOM05D008530 ORTHO05D011436 1.4e-08 63.9 177 35.0
Carub.0006s0144 Capsella rubella HOM05D005207 ORTHO05D011102 3.4e-07 59.3 100 46.0
C08p45840 Brassica napus HOM05D008530 ORTHO05D011436 1.7e-06 57.0 158 33.5


User provided reference genes

Program Settings