Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41722 Brassica carinata HOM05D000848 ORTHO05D018649 7.7e-56 220.3 117 100.0
BolC8t52303H Brassica oleracea HOM05D000848 ORTHO05D018649 3.7e-26 121.7 80 83.8
C08p47620 Brassica napus HOM05D000848 ORTHO05D018649 6.4e-26 120.9 64 100.0
C02p47330 Brassica napus HOM05D000848 ORTHO05D018649 5.6e-22 107.8 64 92.2
BolC2t10773H Brassica oleracea HOM05D000848 ORTHO05D018649 5.6e-22 107.8 64 92.2
BcaC03g16849 Brassica carinata HOM05D000848 ORTHO05D018649 1.1e-20 103.6 82 73.2
BcaC02g11895 Brassica carinata HOM05D000848 ORTHO05D018649 3.1e-20 102.1 66 84.8
C08p47590 Brassica napus HOM05D000101 ORTHO05D000089 4.0e-20 101.7 52 98.1
BolC3t19596H Brassica oleracea HOM05D000848 ORTHO05D011438 1.5e-19 99.8 64 84.4
C03p72960 Brassica napus HOM05D000848 ORTHO05D011438 7.5e-19 97.4 64 85.9
BcaC01g01689 Brassica carinata HOM05D000848 ORTHO05D018649 2.9e-18 95.5 64 84.4
BcaB02g07270 Brassica carinata HOM05D000101 ORTHO05D000089 1.1e-17 93.6 54 87.0
BcaB03g13413 Brassica carinata HOM05D000101 ORTHO05D000089 1.5e-14 83.2 54 77.8
BcaC07g41717 Brassica carinata HOM05D000101 ORTHO05D000089 2.1e-13 79.3 53 75.5
A09p64000 Brassica napus HOM05D000101 ORTHO05D000089 2.1e-13 79.3 53 75.5
BolC8t52294H Brassica oleracea HOM05D000101 ORTHO05D000089 2.1e-13 79.3 53 75.5
C06p23820 Brassica napus HOM05D000101 ORTHO05D000089 2.8e-13 79.0 54 75.9
BolC6t37550H Brassica oleracea HOM05D000101 ORTHO05D000089 2.8e-13 79.0 54 75.9
A07p23110 Brassica napus HOM05D000101 ORTHO05D000089 8.1e-13 77.4 54 74.1
BraA07t29973Z Brassica rapa HOM05D000101 ORTHO05D000089 2.3e-12 75.9 54 72.2
BcaC07g42561 Brassica carinata HOM05D000101 ORTHO05D000089 2.0e-11 72.8 50 74.0
Thhalv10002924m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.2e-08 63.5 53 58.5
AL1G23480 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 5.1e-07 58.2 53 52.8
BraA09t41678Z Brassica rapa HOM05D000101 ORTHO05D000089 6.6e-07 57.8 53 54.7
AT4G10780 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 8.6e-07 57.4 53 56.6
C03p92590 Brassica napus HOM05D000101 ORTHO05D000089 1.5e-06 56.6 53 54.7
Thhalv10006784m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.9e-06 56.2 54 51.9
A09p63950 Brassica napus HOM05D000101 ORTHO05D000089 2.5e-06 55.8 53 52.8
BraA09t41741Z Brassica rapa HOM05D000101 ORTHO05D000089 2.5e-06 55.8 53 52.8
AT1G61190 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 3.3e-06 55.5 54 51.9
BcaC07g41710 Brassica carinata HOM05D000101 ORTHO05D000089 3.3e-06 55.5 53 52.8
BolC8t52287H Brassica oleracea HOM05D000101 ORTHO05D000089 3.3e-06 55.5 53 52.8
CARHR049210 Cardamine hirsuta HOM05D000101 ORTHO05D011607 3.3e-06 55.5 53 50.9
Aa31LG2G12240 Aethionema arabicum HOM05D000101 ORTHO05D000089 4.3e-06 55.1 53 50.9
BolC8t52214H Brassica oleracea HOM05D000101 ORTHO05D000089 4.3e-06 55.1 53 52.8
Carub.0001s1196 Capsella rubella HOM05D000101 ORTHO05D000089 4.3e-06 55.1 54 55.6
Thhalv10024140m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 4.3e-06 55.1 53 52.8
Aa31LG1G3730 Aethionema arabicum HOM05D000101 ORTHO05D000089 5.6e-06 54.7 53 52.8
BraA09t41679Z Brassica rapa HOM05D000101 ORTHO05D000089 5.6e-06 54.7 53 52.8
CARHR049180 Cardamine hirsuta HOM05D000101 ORTHO05D000089 5.6e-06 54.7 53 50.9
BcaB07g31810 Brassica carinata HOM05D000101 ORTHO05D000089 7.3e-06 54.3 50 56.0
BcaC07g42581 Brassica carinata HOM05D000101 ORTHO05D000089 7.3e-06 54.3 53 50.9
CARHR048950 Cardamine hirsuta HOM05D000101 ORTHO05D000089 7.3e-06 54.3 53 52.8
CARHR048990 Cardamine hirsuta HOM05D000101 ORTHO05D011607 7.3e-06 54.3 54 50.0
BcaB03g13168 Brassica carinata HOM05D000101 ORTHO05D000089 9.5e-06 53.9 53 54.7
BcaC07g42562 Brassica carinata HOM05D000101 ORTHO05D027591 9.5e-06 53.9 52 55.8
C08p47540 Brassica napus HOM05D000101 ORTHO05D000089 9.5e-06 53.9 52 55.8
BolC8t52288H Brassica oleracea HOM05D000101 ORTHO05D000089 9.5e-06 53.9 53 50.9
BolC8t52295H Brassica oleracea HOM05D000101 ORTHO05D000089 9.5e-06 53.9 52 55.8


User provided reference genes

Program Settings