Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41667 Brassica carinata HOM05D000051 ORTHO05D039583 4.5e-52 207.6 101 100.0
C08p46830 Brassica napus HOM05D000051 ORTHO05D039583 4.5e-52 207.6 101 100.0
BcaB08g34325 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-32 140.2 101 71.3
BcaB08g37456 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-19 99.8 63 76.2
BcaC07g41671 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-19 99.8 63 76.2
C08p46280 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-19 98.6 64 75.0
BolC8t52177H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-19 98.6 64 75.0
A09p63380 Brassica napus HOM05D000051 ORTHO05D000015 6.5e-19 97.4 63 77.8
BraA09t41687Z Brassica rapa HOM05D000051 ORTHO05D000015 6.5e-19 97.4 63 77.8
C08p46820 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-19 97.1 63 77.8
BcaC07g41622 Brassica carinata HOM05D000537 ORTHO05D000415 1.1e-18 96.7 63 74.6
A09p62770 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-18 96.3 64 73.4
BraA09t41641Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-18 96.3 64 73.4
BolC8t52220H Brassica oleracea HOM05D000051 ORTHO05D000015 1.9e-18 95.9 63 77.8
BcaB08g34327 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-17 93.2 63 74.6
A09p62740 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-16 88.6 63 73.0
A09p62750 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-16 88.6 63 69.8
BraA09t41638Z Brassica rapa HOM05D000051 ORTHO05D000015 3.0e-16 88.6 63 73.0
BraA09t41639Z Brassica rapa HOM05D000051 ORTHO05D000015 3.0e-16 88.6 63 69.8
BolC8t52221H Brassica oleracea HOM05D000051 ORTHO05D000015 5.1e-16 87.8 63 71.4
BcaB08g37460 Brassica carinata HOM05D000051 ORTHO05D000015 4.4e-15 84.7 63 71.4
BcaC07g41672 Brassica carinata HOM05D000537 ORTHO05D000415 4.4e-15 84.7 63 71.4
BraA09t41688Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-15 84.7 63 71.4
C08p46860 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-14 82.0 63 69.8
BcaB08g37454 Brassica carinata HOM05D000537 ORTHO05D000415 4.8e-14 81.3 64 67.2
BcaB08g37455 Brassica carinata HOM05D000051 ORTHO05D000015 1.4e-13 79.7 63 68.3
CARHR014170 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-13 79.3 59 62.7
A09p62710 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-13 79.0 63 66.7
Thhalv10007600m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.3e-13 77.8 62 61.3
BcaB02g10549 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-12 76.6 63 66.7
BcaB08g34328 Brassica carinata HOM05D000537 ORTHO05D000415 1.2e-12 76.6 64 67.2
BraA09t41636Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-12 75.9 63 65.1
AL1G25580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-11 72.8 59 57.6
BcaB02g06477 Brassica carinata HOM05D000051 ORTHO05D000015 8.5e-11 70.5 62 58.1
C05p11640 Brassica napus HOM05D000051 ORTHO05D000015 8.5e-11 70.5 60 58.3
BolC5t29911H Brassica oleracea HOM05D000051 ORTHO05D000015 8.5e-11 70.5 60 58.3
C05p11630 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-10 69.7 62 53.2
BolC5t29909H Brassica oleracea HOM05D000051 ORTHO05D000015 1.5e-10 69.7 62 53.2
BcaC05g25285 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-10 69.3 62 53.2
A06p09830 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-10 68.6 60 56.7
BraA06t24173Z Brassica rapa HOM05D000051 ORTHO05D000015 4.2e-10 68.2 60 55.0
BraA06t24176Z Brassica rapa HOM05D000051 ORTHO05D000015 2.1e-09 65.9 60 56.7
AT1G13780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.7e-09 65.5 59 54.2
A06p09880 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-09 65.1 60 55.0
AL6G39170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.7e-09 64.7 60 58.3
A06p09870 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-08 63.5 99 43.4
AL3G54200 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-08 62.8 59 57.6
BraA06t24175Z Brassica rapa HOM05D000051 ORTHO05D000015 4.0e-08 61.6 74 51.4
Carub.0006s2480 Capsella rubella HOM05D000051 ORTHO05D000015 5.2e-08 61.2 60 55.0
AT5G27750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.7e-08 60.8 68 50.0


User provided reference genes

Program Settings