Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41582 Brassica carinata HOM05D000767 ORTHO05D024040 9.4e-56 219.9 109 100.0
C08p45830 Brassica napus HOM05D000767 ORTHO05D024040 9.4e-56 219.9 109 100.0
BolC8t52136H Brassica oleracea HOM05D000767 ORTHO05D024040 9.4e-56 219.9 109 100.0
BraA09t41592Z Brassica rapa HOM05D000558 ORTHO05D024040 2.9e-49 198.4 104 94.2
A09p62300 Brassica napus HOM05D000767 ORTHO05D024040 3.3e-45 184.9 104 88.5
BcaC07g41653 Brassica carinata HOM05D000767 ORTHO05D000635 8.0e-39 163.7 106 80.2
C08p46550 Brassica napus HOM05D000767 ORTHO05D000635 8.0e-39 163.7 106 80.2
BcaB08g34290 Brassica carinata HOM05D000767 ORTHO05D000635 1.0e-33 146.7 105 75.2
C08p16070 Brassica napus HOM05D000767 ORTHO05D000635 3.2e-32 141.7 103 71.8
Sp1g11810 Schrenkiella parvula HOM05D000767 ORTHO05D000635 5.5e-32 141.0 102 74.5
BolC8t49229H Brassica oleracea HOM05D000767 ORTHO05D000635 2.7e-31 138.7 103 70.9
AL1G25060 Arabidopsis lyrata HOM05D000767 ORTHO05D000635 2.3e-30 135.6 104 70.2
A08p32360 Brassica napus HOM05D000767 ORTHO05D000635 5.2e-30 134.4 103 68.9
AT1G13300 Arabidopsis thaliana HOM05D000767 ORTHO05D000635 6.8e-30 134.0 105 72.4
BraA08t35159Z Brassica rapa HOM05D000767 ORTHO05D000635 6.8e-30 134.0 103 68.9
Carub.0001s1303 Capsella rubella HOM05D000767 ORTHO05D000635 1.7e-28 129.4 106 69.8
BolC5t29752H Brassica oleracea HOM05D000767 ORTHO05D000635 4.8e-28 127.9 107 65.4
BraA06t24040Z Brassica rapa HOM05D000767 ORTHO05D000635 3.1e-27 125.2 104 65.4
C05p10040 Brassica napus HOM05D000767 ORTHO05D000635 5.4e-27 124.4 107 64.5
A06p08440 Brassica napus HOM05D000767 ORTHO05D000635 7.0e-27 124.0 104 65.4
Thhalv10008054m.g Eutrema salsugineum HOM05D000767 ORTHO05D000635 4.5e-26 121.3 104 65.4
CARHR013680 Cardamine hirsuta HOM05D000767 ORTHO05D000635 3.8e-25 118.2 91 70.3
BcaC05g25066 Brassica carinata HOM05D000767 ORTHO05D000635 6.5e-25 117.5 134 53.7
BcaB07g30632 Brassica carinata HOM05D000767 ORTHO05D000635 5.8e-13 77.8 95 50.5
AT3G25790 Arabidopsis thaliana HOM05D000767 ORTHO05D000635 1.7e-12 76.3 102 48.0
BcaC04g21418 Brassica carinata HOM05D000767 ORTHO05D000635 1.7e-12 76.3 95 50.5
A09p25020 Brassica napus HOM05D000767 ORTHO05D000635 2.2e-12 75.9 95 50.5
BraA09t38090Z Brassica rapa HOM05D000767 ORTHO05D000635 2.2e-12 75.9 95 50.5
C09p32010 Brassica napus HOM05D000767 ORTHO05D000635 6.4e-12 74.3 95 49.5
BolC9t56055H Brassica oleracea HOM05D000767 ORTHO05D000635 6.4e-12 74.3 95 49.5
C07p34680 Brassica napus HOM05D000767 ORTHO05D000635 1.1e-11 73.6 100 50.0
Sp2g15030 Schrenkiella parvula HOM05D000767 ORTHO05D000635 1.9e-11 72.8 96 46.9
Aa31LG1G1450 Aethionema arabicum HOM05D000767 ORTHO05D000635 4.1e-11 71.6 109 46.8
BolC7t44000H Brassica oleracea HOM05D000767 ORTHO05D000635 5.4e-11 71.2 102 49.0
AL5G14360 Arabidopsis lyrata HOM05D000767 ORTHO05D000635 1.2e-10 70.1 111 43.2
Thhalv10004475m.g Eutrema salsugineum HOM05D000767 ORTHO05D000635 2.7e-10 68.9 101 51.5
A06p42520 Brassica napus HOM05D000767 ORTHO05D000635 3.5e-10 68.6 102 49.0
THA.LOC104824036 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 3.5e-10 68.6 98 45.9
BcaC06g33957 Brassica carinata HOM05D000767 ORTHO05D000635 6.0e-10 67.8 101 47.5
BraA06t27167Z Brassica rapa HOM05D000767 ORTHO05D000635 7.8e-10 67.4 104 48.1
BcaC06g31118 Brassica carinata HOM05D000767 ORTHO05D000635 3.0e-09 65.5 104 47.1
Carub.0005s0362 Capsella rubella HOM05D000767 ORTHO05D000635 3.9e-09 65.1 107 41.1
Thhalv10018737m.g Eutrema salsugineum HOM05D000767 ORTHO05D000635 2.8e-07 58.9 76 48.7
CARHR146700 Cardamine hirsuta HOM05D000767 ORTHO05D000635 8.0e-07 57.4 103 38.8
THA.LOC104804876 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 8.0e-07 57.4 96 39.6
THA.LOC104825708 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 6.8e-06 54.3 98 41.8
Aa31sc1211G10 Aethionema arabicum HOM05D000767 ORTHO05D000635 8.9e-06 53.9 78 42.3


User provided reference genes

Program Settings