Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41562 Brassica carinata HOM05D002557 ORTHO05D027730 1.7e-35 152.1 77 100.0
BolC8t52114H Brassica oleracea HOM05D032881 ORTHO05D027730 2.1e-17 92.0 58 86.2
AT1G14570 Arabidopsis thaliana HOM05D002557 ORTHO05D002563 3.3e-15 84.7 178 37.1
BcaB02g06515 Brassica carinata HOM05D002557 ORTHO05D002563 3.3e-15 84.7 174 35.6
Carub.0001s1433 Capsella rubella HOM05D002557 ORTHO05D002563 9.7e-15 83.2 178 36.5
Thhalv10007578m.g Eutrema salsugineum HOM05D002557 ORTHO05D002563 9.7e-15 83.2 178 37.1
Sp1g12920 Schrenkiella parvula HOM05D002557 ORTHO05D002563 9.7e-15 83.2 178 36.0
BcaC05g25366 Brassica carinata HOM05D002557 ORTHO05D002563 1.3e-14 82.8 179 36.3
C05p12480 Brassica napus HOM05D002557 ORTHO05D002563 1.3e-14 82.8 179 36.3
BolC5t29995H Brassica oleracea HOM05D002557 ORTHO05D002563 1.3e-14 82.8 179 36.3
CARHR015070 Cardamine hirsuta HOM05D002557 ORTHO05D002563 1.6e-14 82.4 178 36.5
BcaB03g13093 Brassica carinata HOM05D002557 ORTHO05D002563 2.2e-14 82.0 172 36.6
BcaC07g38745 Brassica carinata HOM05D002557 ORTHO05D002563 2.2e-14 82.0 172 36.6
A06p10610 Brassica napus HOM05D002557 ORTHO05D002563 2.2e-14 82.0 179 34.6
BraA06t24241Z Brassica rapa HOM05D002557 ORTHO05D002563 2.2e-14 82.0 179 34.6
AL1G26540 Arabidopsis lyrata HOM05D002557 ORTHO05D002563 2.8e-14 81.6 178 36.0
BolC8t49298H Brassica oleracea HOM05D002557 ORTHO05D002563 1.1e-13 79.7 172 36.0
Aa31LG1G500 Aethionema arabicum HOM05D002557 ORTHO05D002563 5.5e-10 67.4 42 81.0
Ah.03g147140 Amaranthus hybridus HOM05D002557 ORTHO05D002563 3.0e-08 61.6 40 72.5
A08p31920 Brassica napus HOM05D002557 ORTHO05D002563 6.7e-08 60.5 71 46.5
BraA08t35114Z Brassica rapa HOM05D002557 ORTHO05D002563 1.5e-07 59.3 30 86.7
Sc03g0005500 Simmondsia chinensis HOM05D002557 ORTHO05D002563 3.3e-07 58.2 41 63.4
C08p16780 Brassica napus HOM05D002557 ORTHO05D002563 7.4e-07 57.0 30 83.3
THA.LOC104805119 Tarenaya hassleriana HOM05D002557 ORTHO05D002563 1.3e-06 56.2 41 65.9
ECA233G3057 Erigeron canadensis HOM05D002557 ORTHO05D002563 1.7e-06 55.8 41 68.3
Glyma.08G267900 Glycine max HOM05D002557 ORTHO05D002563 1.7e-06 55.8 41 63.4
CsaV3_5G012900 Cucumis sativus L. HOM05D002557 ORTHO05D002563 2.2e-06 55.5 40 60.0
HanXRQChr12g0365861 Helianthus annuus HOM05D002557 ORTHO05D002563 2.2e-06 55.5 39 66.7
THA.LOC104824106 Tarenaya hassleriana HOM05D002557 ORTHO05D002563 2.2e-06 55.5 174 29.9
vmacro10777 Vaccinium macrocarpon HOM05D002557 ORTHO05D002563 2.2e-06 55.5 40 65.0
Aa31LG2G7850 Aethionema arabicum HOM05D002557 ORTHO05D002563 2.8e-06 55.1 41 63.4
Phvul.003G282600 Phaseolus vulgaris HOM05D002557 ORTHO05D002563 2.8e-06 55.1 40 65.0
VMungo0251G3689 Vigna mungo HOM05D002557 ORTHO05D002563 3.7e-06 54.7 40 62.5
CDE02G1991 Ceratophyllum demersum HOM05D002557 ORTHO05D002563 4.8e-06 54.3 40 62.5
Nn4g24811 Nelumbo nucifera HOM05D002557 ORTHO05D002563 6.3e-06 53.9 40 62.5
Oeu001131.1 Olea europaea HOM05D002557 ORTHO05D002563 6.3e-06 53.9 40 62.5
MELO3C020075.2 Cucumis melo HOM05D002557 ORTHO05D002563 8.2e-06 53.5 40 57.5
Medtr8g070760 Medicago truncatula HOM05D002557 ORTHO05D002563 8.2e-06 53.5 40 62.5


User provided reference genes

Program Settings