Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41411 Brassica carinata HOM05D008786 ORTHO05D011065 1.6e-46 189.1 98 100.0
BcaC07g41429 Brassica carinata HOM05D008786 ORTHO05D011065 2.3e-37 158.7 99 87.9
C08p43960 Brassica napus HOM05D008786 ORTHO05D011065 2.3e-37 158.7 99 87.9
A09p60480 Brassica napus HOM05D008786 ORTHO05D011065 5.7e-36 154.1 94 87.2
BraA06t24477Z Brassica rapa HOM05D008786 ORTHO05D011065 7.2e-31 137.1 105 72.4
C05p15680 Brassica napus HOM05D008786 ORTHO05D011065 9.4e-31 136.7 101 76.2
Thhalv10009909m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 9.4e-31 136.7 98 79.6
Sp1g15420 Schrenkiella parvula HOM05D008786 ORTHO05D011065 2.1e-30 135.6 98 76.5
A06p13240 Brassica napus HOM05D008786 ORTHO05D011065 3.6e-30 134.8 105 73.3
AL1G29540 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 1.4e-29 132.9 98 78.6
AT1G17285 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 7.4e-28 127.1 99 77.8
BraA09t41419Z Brassica rapa HOM05D001342 ORTHO05D001286 3.7e-27 124.8 75 89.3
BolC8t51945H Brassica oleracea HOM05D001342 ORTHO05D001286 1.1e-26 123.2 76 89.5
BolC5t30275H Brassica oleracea HOM05D001342 ORTHO05D001286 6.5e-24 114.0 97 67.0
CARHR017880 Cardamine hirsuta HOM05D008786 ORTHO05D011065 1.1e-23 113.2 98 70.4
BcaB07g34035 Brassica carinata HOM05D008786 ORTHO05D011065 4.2e-23 111.3 98 68.4
BcaC05g25651 Brassica carinata HOM05D008786 ORTHO05D011065 4.7e-22 107.8 76 76.3
AT1G17300 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 4.8e-19 97.8 74 79.7
Carub.0001s1705 Capsella rubella HOM05D008786 ORTHO05D011065 1.1e-18 96.7 76 77.6
AL1G29560 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 2.6e-17 92.0 75 77.3
THA.LOC104812274 Tarenaya hassleriana HOM05D008786 ORTHO05D011065 1.5e-15 86.3 99 55.6
BcaB05g24747 Brassica carinata HOM05D008786 ORTHO05D011065 1.6e-14 82.8 91 58.2
CARHR065230 Cardamine hirsuta HOM05D008786 ORTHO05D011065 2.7e-14 82.0 97 54.6
Aa31LG7G2110 Aethionema arabicum HOM05D008786 ORTHO05D011065 8.0e-14 80.5 104 58.7
BcaB03g15660 Brassica carinata HOM05D008786 ORTHO05D011065 2.8e-11 72.0 96 53.1
A07p30280 Brassica napus HOM05D008786 ORTHO05D042067 4.8e-11 71.2 92 51.1
Carub.0002s1917 Capsella rubella HOM05D008786 ORTHO05D011065 8.3e-11 70.5 94 52.1
BcaB03g14979 Brassica carinata HOM05D008786 ORTHO05D011065 1.1e-10 70.1 91 48.4
BcaC08g46687 Brassica carinata HOM05D008786 ORTHO05D011065 5.4e-10 67.8 93 50.5
C06p46670 Brassica napus HOM05D008786 ORTHO05D011065 5.4e-10 67.8 93 50.5
BolC6t39712H Brassica oleracea HOM05D008786 ORTHO05D011065 5.4e-10 67.8 93 50.5
BraA07t31409Z Brassica rapa HOM05D008786 ORTHO05D011065 5.4e-10 67.8 91 51.6
A07p38490 Brassica napus HOM05D008786 ORTHO05D011065 7.0e-10 67.4 91 51.6
C06p35030 Brassica napus HOM05D008786 ORTHO05D011065 7.0e-10 67.4 96 52.1
BolC6t38602H Brassica oleracea HOM05D008786 ORTHO05D011065 7.0e-10 67.4 96 52.1
Thhalv10019794m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 1.6e-09 66.2 71 59.2
BolC2t09030H Brassica oleracea HOM05D008786 ORTHO05D011065 5.9e-09 64.3 69 58.0
Sp5g27390 Schrenkiella parvula HOM05D008786 ORTHO05D011065 7.7e-09 63.9 89 48.3
Aa31LG4G2690 Aethionema arabicum HOM05D008786 ORTHO05D011065 1.7e-08 62.8 94 51.1
BcaC08g45715 Brassica carinata HOM05D008786 ORTHO05D011065 2.2e-08 62.4 74 58.1
BraA02t06842Z Brassica rapa HOM05D008786 ORTHO05D011065 2.9e-08 62.0 81 56.8
C02p29830 Brassica napus HOM05D008786 ORTHO05D011065 5.0e-08 61.2 81 51.9
BcaC03g15370 Brassica carinata HOM05D008786 ORTHO05D011065 6.5e-08 60.8 80 52.5
AL8G24690 Arabidopsis lyrata HOM05D011936 ORTHO05D014852 6.1e-06 54.3 88 50.0
Cpa.g.sc25.197 Carica papaya HOM05D008671 ORTHO05D010581 6.1e-06 54.3 99 36.4


User provided reference genes

Program Settings