Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 3.2e-279 964.5 511 100.0
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 4.1e-218 761.5 501 82.8
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 3.7e-195 685.3 511 76.5
C07p48840 Brassica napus HOM05D011932 ORTHO05D024153 1.1e-159 567.4 432 74.1
BolC7t45392H Brassica oleracea HOM05D011932 ORTHO05D024153 1.1e-159 567.4 432 74.1
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 7.4e-119 431.8 306 77.5
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 6.2e-118 428.7 306 76.1
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 1.8e-117 427.2 301 77.1
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 5.7e-95 352.4 229 84.3
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 1.1e-69 268.5 170 83.5
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 4.9e-38 163.3 167 61.1
C02p56160 Brassica napus HOM05D011932 ORTHO05D101013 3.6e-33 147.1 133 62.4
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 2.9e-30 137.5 171 58.5
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 4.9e-30 136.7 170 57.6
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 9.2e-29 132.5 150 58.7
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 9.2e-29 132.5 150 60.0
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 9.2e-29 132.5 150 60.0
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 3.5e-28 130.6 150 59.3
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 1.7e-27 128.3 150 58.7
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 3.0e-27 127.5 173 53.2
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 8.6e-27 125.9 150 58.0
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 1.1e-26 125.6 173 52.6
A06p27480 Brassica napus HOM05D011932 ORTHO05D096777 2.5e-26 124.4 83 81.9
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 1.6e-25 121.7 180 50.0
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 4.7e-25 120.2 167 52.7
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 4.7e-25 120.2 167 52.7
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.1e-21 109.0 145 53.1
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 1.1e-21 109.0 145 53.1
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.9e-21 108.2 546 29.7
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 1.9e-21 108.2 145 52.4
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 1.9e-21 108.2 145 52.4
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 2.5e-18 97.8 180 41.1
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 2.4e-16 91.3 228 37.3
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 3.4e-15 87.4 149 52.3
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 1.7e-14 85.1 90 61.1
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 7.1e-13 79.7 164 40.2
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 2.3e-11 74.7 528 27.8
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 6.6e-11 73.2 163 38.0
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 6.6e-11 73.2 163 38.0
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 4.0e-08 63.9 415 27.5
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 4.0e-08 63.9 415 27.5
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 6.9e-08 63.2 78 53.8
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 9.0e-08 62.8 78 53.8
BcaB06g28528 Brassica carinata HOM05D009883 ORTHO05D014964 9.9e-07 59.3 94 46.8
BcaNung02568 Brassica carinata HOM05D021780 ORTHO05D021716 2.2e-06 58.2 48 70.8


User provided reference genes

Program Settings