Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 0.0e+00 1350.1 698 100.0
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 0.0e+00 1319.3 700 98.1
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 0.0e+00 1293.1 729 93.4
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 0.0e+00 1267.7 703 93.0
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 0.0e+00 1204.1 711 90.4
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 0.0e+00 1203.0 704 86.5
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 0.0e+00 1175.6 748 85.0
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 0.0e+00 1164.4 708 83.9
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 0.0e+00 1161.4 698 85.1
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 0.0e+00 1152.9 696 83.5
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 0.0e+00 1136.7 645 88.2
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 1.4e-311 1072.4 760 73.0
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.3e-283 979.5 694 73.5
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 4.5e-228 795.0 699 57.1
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 5.0e-227 791.6 693 57.7
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.6e-225 786.6 699 57.4
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.7e-225 785.8 707 56.9
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.3e-222 776.9 646 59.4
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.1e-221 773.9 695 55.5
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 3.1e-221 772.3 694 56.8
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 2.0e-220 769.6 709 55.7
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.2e-218 761.9 704 53.7
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 2.3e-216 756.1 694 53.9
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 2.3e-216 756.1 706 54.4
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 3.0e-216 755.7 709 54.0
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 8.8e-216 754.2 703 56.2
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 2.0e-215 753.1 703 54.1
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 2.2e-214 749.6 703 54.6
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 2.8e-214 749.2 694 53.6
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.1e-213 747.3 695 53.5
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 7.0e-213 744.6 632 57.1
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 3.5e-212 742.3 691 52.5
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 8.6e-211 737.6 696 54.7
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 1.1e-210 737.3 695 53.7
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 3.3e-210 735.7 706 53.1
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 8.0e-209 731.1 645 54.9
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 3.4e-207 725.7 690 52.2
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 4.4e-207 725.3 703 53.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 3.2e-205 719.2 699 53.4
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 4.1e-205 718.8 698 55.3
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 5.4e-205 718.4 701 55.1
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 7.0e-205 718.0 697 53.5
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 2.7e-204 716.1 699 51.8
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.0e-203 714.1 691 51.1
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 1.7e-203 713.4 699 52.2
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 2.9e-203 712.6 697 50.9
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 3.6e-201 705.7 707 49.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 1.8e-200 703.4 693 50.2
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.3e-198 697.2 738 48.5
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 2.2e-198 696.4 696 50.3
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 4.9e-198 695.3 705 49.6
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 2.0e-191 673.3 707 48.5
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 4.4e-191 672.2 703 49.8
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 9.8e-191 671.0 701 48.4
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 2.2e-190 669.8 708 48.6
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 6.4e-190 668.3 701 47.4
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 1.4e-189 667.2 695 48.5
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.3e-187 660.6 679 50.5
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 3.9e-187 659.1 698 48.0
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.5e-186 657.1 695 47.6
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 4.7e-185 652.1 692 50.7
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.8e-184 650.2 707 49.8
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 1.8e-184 650.2 850 44.7
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 6.8e-184 648.3 700 50.9
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 6.8e-184 648.3 712 48.2
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 1.3e-182 644.0 701 48.4
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 5.4e-181 638.6 709 48.5
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 1.2e-180 637.5 693 47.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 1.3e-179 634.0 696 47.4
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 3.0e-179 632.9 701 49.1
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 3.9e-179 632.5 706 48.6
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 3.3e-178 629.4 696 48.1
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 1.1e-176 624.4 720 47.4
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 1.2e-175 620.9 647 49.0
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 2.0e-175 620.2 732 46.9
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.1e-173 614.4 708 48.3
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 2.4e-173 613.2 709 48.7
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 3.9e-171 605.9 691 44.9
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 4.9e-166 589.0 648 48.9
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 7.1e-165 585.1 600 50.7
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 7.9e-156 555.1 717 43.4
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 7.4e-154 548.5 699 42.3
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 5.3e-152 542.3 747 41.1
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 8.4e-150 535.0 697 41.2
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.6e-132 477.6 264 87.1
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 7.9e-132 475.3 651 39.9
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 7.4e-130 468.8 588 44.0
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 2.2e-129 467.2 450 52.4
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 8.5e-126 455.3 376 55.9
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 1.4e-125 454.5 689 38.9
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 5.5e-125 452.6 558 43.7
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 8.2e-121 438.7 454 49.3
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 8.2e-121 438.7 427 52.9
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 2.5e-117 427.2 593 39.3
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 1.3e-113 414.8 472 49.2
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 9.1e-112 408.7 693 35.1
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 4.8e-105 386.3 332 57.8
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 1.3e-94 351.7 586 37.2
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 8.0e-92 342.4 539 35.6
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.6e-77 293.1 348 42.2
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 1.1e-75 288.9 319 46.4
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.5e-69 268.5 275 51.6
Ca_14652_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 8.4e-57 226.1 251 45.8
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 1.9e-56 224.9 277 45.5
Sopen03g034830 Solanum pennellii HOM05D004701 ORTHO05D005220 1.6e-55 221.9 220 49.1
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 4.6e-55 220.3 251 45.4
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.1e-52 209.5 312 37.8
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 1.4e-48 198.7 198 53.5
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 6.2e-44 183.3 291 44.3
Cc00_g08360 Coffea canephora HOM05D004701 ORTHO05D005220 4.3e-37 160.6 159 48.4
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.1e-36 156.4 328 31.4
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.8e-35 155.2 516 28.1
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-34 152.1 400 27.8
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.0e-34 151.8 327 31.5
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 7.6e-34 149.8 212 42.9
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 8.4e-33 146.4 233 35.6
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 7.1e-32 143.3 185 41.1
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 7.9e-31 139.8 87 71.3
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.7e-29 133.7 240 35.4
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.7e-28 131.0 197 35.0
Cre02.g118450 Chlamydomonas reinhardtii HOM05D004701 ORTHO05D005220 8.2e-28 129.8 479 26.3
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 1.8e-27 128.6 173 43.4
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.1e-27 127.9 330 31.2
SEGI_06018 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 1.4e-24 119.0 143 39.9
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.2e-23 115.9 240 32.1
PRCOL_00003726 Prasinoderma coloniale HOM05D004701 ORTHO05D005220 7.9e-23 113.2 434 24.9
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 1.0e-22 112.8 160 42.5
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.0e-22 112.8 277 29.6
MD14G1203300 Malus domestica HOM05D004701 ORTHO05D005220 1.6e-20 105.5 117 46.2
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.8e-19 102.1 158 40.5
AagrBONN_evm.TU.Sc2ySwM_344.2753 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.5e-18 97.4 417 24.0
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-16 92.8 257 28.8
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-16 92.8 136 38.2
Oeu052446.1 Olea europaea HOM05D004701 ORTHO05D005220 6.7e-14 83.6 150 34.0
Oeu052444.1 Olea europaea HOM05D004701 ORTHO05D005220 2.0e-13 82.0 62 54.8
Cpa.g.sc3599.1 Carica papaya HOM05D004701 ORTHO05D005220 3.3e-13 81.3 62 64.5
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 2.2e-12 78.6 58 63.8
Lsat_1_v5_gn_3_76880 Lactuca sativa HOM05D005083 ORTHO05D006310 2.2e-12 78.6 102 44.1
MD14G1127800 Malus domestica HOM05D004701 ORTHO05D005220 2.8e-12 78.2 76 47.4
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 3.7e-12 77.8 144 29.9
Ah.11g048280 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.8e-11 75.5 84 44.0
Lj5A108T60 Lonicera japonica HOM05D004701 ORTHO05D005220 2.4e-11 75.1 134 38.1
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-10 72.4 172 32.0
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 2.6e-10 71.6 58 62.1
SGA_v2.0_scaffold313G48342 Striga asiatica HOM05D004701 ORTHO05D005220 2.6e-10 71.6 132 50.0
MBI18_g07590_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D015058 1.7e-09 68.9 55 52.7
SMO286G0021 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.5e-08 65.1 173 28.3
MELO3C028766.2 Cucumis melo HOM05D001162 ORTHO05D022475 7.2e-08 63.5 46 56.5
CSS0009827 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.6e-07 62.4 72 50.0
CSS0027371 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 6.1e-07 60.5 41 61.0
CSS0048671 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.4e-06 59.3 72 43.1
CSS0018594 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.8e-06 58.9 41 58.5
TPR.G35422 Trifolium pratense HOM05D000175 ORTHO05D001341 5.2e-06 57.4 128 28.1
CSS0034852 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 8.8e-06 56.6 72 41.7


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