Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41188 Brassica carinata HOM05D000609 ORTHO05D000462 1.4e-96 356.3 179 100.0
BcaC07g41187 Brassica carinata HOM05D000609 ORTHO05D000462 1.0e-91 340.1 170 100.0
C08p41950 Brassica napus HOM05D000609 ORTHO05D000462 1.0e-91 340.1 170 100.0
BolC8t51758H Brassica oleracea HOM05D000609 ORTHO05D000462 1.0e-91 340.1 170 100.0
A09p58660 Brassica napus HOM05D000609 ORTHO05D000462 1.2e-76 290.0 174 91.4
BraA09t41252Z Brassica rapa HOM05D000609 ORTHO05D000462 1.2e-76 290.0 174 91.4
BcaB08g34947 Brassica carinata HOM05D000609 ORTHO05D000462 5.6e-66 254.6 202 74.3
Sp3g34150 Schrenkiella parvula HOM05D000609 ORTHO05D000462 6.5e-38 161.4 197 56.3
Carub.0003s3555 Capsella rubella HOM05D000609 ORTHO05D000462 1.6e-36 156.8 204 56.4
CARHR111650 Cardamine hirsuta HOM05D000609 ORTHO05D000462 4.7e-36 155.2 199 58.3
AL3G54150 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 1.0e-35 154.1 201 56.2
AT2G20880 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 6.3e-33 144.8 199 54.3
Thhalv10002185m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 5.9e-31 138.3 188 54.3
THA.LOC104824714 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 8.3e-17 91.3 236 39.4
Thhalv10025862m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 2.1e-12 76.6 141 43.3
AL7G24460 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 1.4e-11 73.9 137 43.1
BcaC07g38315 Brassica carinata HOM05D000609 ORTHO05D000462 6.8e-11 71.6 157 40.1
C08p10660 Brassica napus HOM05D000609 ORTHO05D000462 6.8e-11 71.6 157 40.1
CARHR235850 Cardamine hirsuta HOM05D000609 ORTHO05D000462 6.8e-11 71.6 136 42.6
BcaNung01593 Brassica carinata HOM05D000609 ORTHO05D000462 1.5e-10 70.5 141 41.8
Aa31LG2G22040 Aethionema arabicum HOM05D000609 ORTHO05D000462 2.6e-10 69.7 175 37.7
BcaB03g12557 Brassica carinata HOM05D000609 ORTHO05D000462 2.6e-10 69.7 133 42.1
BraA01t01891Z Brassica rapa HOM05D000609 ORTHO05D000462 2.6e-10 69.7 162 40.1
BolC8t48739H Brassica oleracea HOM05D000609 ORTHO05D000462 4.4e-10 68.9 157 39.5
BraA08t33980Z Brassica rapa HOM05D000609 ORTHO05D000462 7.5e-10 68.2 136 41.9
A08p20210 Brassica napus HOM05D000609 ORTHO05D000462 9.8e-10 67.8 136 41.9
Cfa014583 Carpinus fangiana HOM05D000609 ORTHO05D000462 9.8e-10 67.8 225 32.9
CiPaw.03G174500 Carya illinoinensis HOM05D000609 ORTHO05D000462 1.3e-09 67.4 226 31.9
Sp7g26090 Schrenkiella parvula HOM05D000609 ORTHO05D000462 1.7e-09 67.0 142 40.8
Haze_13135 Corylus avellana HOM05D000609 ORTHO05D000462 2.8e-09 66.2 226 33.2
Gorai.012G130600 Gossypium raimondii HOM05D000609 ORTHO05D000462 2.8e-09 66.2 130 37.7
A01p19540 Brassica napus HOM05D000609 ORTHO05D000462 3.7e-09 65.9 162 38.9
Carub.0007s1263 Capsella rubella HOM05D000609 ORTHO05D000462 5.4e-08 62.0 138 37.7
THA.LOC104814487 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 1.6e-07 60.5 168 38.1
TWI18G0869 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 2.0e-07 60.1 223 31.4
Glyma.06G295300 Glycine max HOM05D000609 ORTHO05D000462 2.7e-07 59.7 195 34.4
Ciclev10015144m.g Citrus clementina HOM05D000609 ORTHO05D000462 4.5e-07 58.9 225 31.6
Sabra19G0113400 Salix brachista HOM05D000609 ORTHO05D000462 1.0e-06 57.8 179 34.1
Phvul.005G105200 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 1.7e-06 57.0 214 32.7
Potri.019G102200 Populus trichocarpa HOM05D000609 ORTHO05D000462 8.6e-06 54.7 192 33.3


User provided reference genes

Program Settings