Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 1.1e-87 326.6 172 100.0
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 1.1e-87 326.6 172 100.0
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 1.0e-64 250.4 175 81.1
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 1.0e-64 250.4 175 81.1
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 1.3e-64 250.0 175 80.6
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 8.6e-64 247.3 175 80.0
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.3e-56 223.4 166 75.3
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 1.1e-50 203.8 155 74.2
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 2.2e-43 179.5 171 60.2
AT2G21237 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 4.6e-41 171.8 178 57.9
AL4G10370 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 4.8e-38 161.8 169 58.6
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.9e-31 139.8 179 48.6
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 4.8e-30 135.2 156 54.5
Sp4g00430 Schrenkiella parvula HOM05D009526 ORTHO05D011552 9.0e-29 131.0 94 75.5
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.0e-27 127.5 179 44.1
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 2.2e-27 126.3 163 47.9
Thhalv10027568m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 3.2e-26 122.5 156 49.4
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 4.2e-26 122.1 169 43.8
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 1.6e-25 120.2 167 42.5
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 3.6e-25 119.0 165 43.0
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 4.6e-25 118.6 168 42.3
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 4.6e-25 118.6 168 42.3
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 6.1e-25 118.2 165 42.4
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 1.0e-19 100.9 125 47.2
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 6.1e-09 65.1 164 29.3
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 6.1e-09 65.1 61 44.3
BcaC02g08806 Brassica carinata HOM05D000624 ORTHO05D000495 5.2e-08 62.0 45 75.6
Rhsim11G0184400 Rhododendron simsii HOM05D030420 ORTHO05D011552 5.7e-07 58.5 111 29.7
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 1.3e-06 57.4 84 40.5
TWI75G0567 Tripterygium wilfordii HOM05D009526 ORTHO05D011552 1.3e-06 57.4 110 32.7


User provided reference genes

Program Settings